Balearica regulorum gibbericeps (East African grey crowned-crane): 104636655
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Entry
104636655 CDS
T09009
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin gamma-C3-like
KO
K16497
protocadherin gamma subfamily C
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
breg04515
]
104636655
Cell adhesion molecules [BR:
breg04515
]
Cadherins
Protocadherins
104636655
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_C_2
Cadherin_2
Cadherin_CELSR2_9th
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
104636655
NCBI-ProteinID:
XP_010302179
LinkDB
All DBs
Position
Unknown
AA seq
1285 aa
AA seq
DB search
ERIDREELCGALSPCSLSFEIVVENPLELYSGAVEIQDINDNDPVFPSSQARLEISESVA
GGGRAPXXXXXXXXXXDPDVGINSLQTYQLSANPHFALDVQTRVDGSKYAELVLEKELDR
EEQRELHLVLTALDGGSPPRSAHVQIHIDVVDANDNAPVFNQSTYKASVRENTPSGTLVA
RISAYDLDDGPNGDIVYSFSSHTPAKVRELFALDSATGELRVKGQLDYEETKLYEIYLQA
KDKGAVPGVAHCKVLVEVVDVNDNTPEVTVTSVYSPVPEDAAPGTVVALLSVTDLDSHDN
GLVNCLISPGIPFMLSSSLKNYYTLKTKAALDREKASEYNITITARDSGSPPLSAVKQIL
VQVSDVNDNAPKSSQDSYDVYVLENNVPGIPILNVSATDPDLGRNAHLSYTLLQGDPTVG
HIFSINRENGTLYLLTSLDHEDQVEFSMMVQVQDGGSPPLATNVSVSVFVTDLNDNAPTV
LYPHPNTTTTYTDVVAPGTAAGHMVTKVVAVDADAGYNAWISYTLLQATDPSLFSVGLHN
GEIFTARQLREDDAPQHTLVILLXXXXXXXXXXSASATVSISVAEMVKEVLTDLTDVAPA
NDPRRHVTFYLILAVILVSAAFFITMLSVGIFKCYKWRQSKELFNSSRSTLYRTPGPFHH
IDAVRGGLTPPNFYHQVYLTTDSRQSDLLCKKPFTSSPLGSRQSTMRNGEPGLYHQIVGT
ATRLPTPAEHRTLRIAESATVAARFPLESAQDPDVGTNAVGSYRLSPNSHFSLDVKQQQD
GKLFPELLVLERALDREEQPELQLVLTAMDGGSPARSGTAQITVLVLDVNDNAPTFDRAT
YKVQVPENTPVGALLLQLNASDPDEGPNGETQYSFGVHTSDSVRRLFALDPRSGEVRVSG
ALDFEESPFYEIYVRAHDGGVPEMEGHCSLRNPVPEDTPLETVVGLFNVRDRDSGANGYV
SLEISPDVPFTIRSLQNHFSLVTRESLDRESTSQYVVELIAQDGGSPILTTTLTLLLNIS
DVNDNPPRFSQPSYDAFILENNPPGSLLCTVSASDPDDGDNSRLVYSIESGQVQGAPTSS
FVHINPDNGNLYAQRTFDFELLQVLPVSVAVRDSGSPPLHANVTVYIFVLDQNDHPPTIL
HPASDIPAPQRVPLSAPPGYLVTKVTAVDADAGHNAWLSYQLLPQSTDPSLFHMSLYTGE
VRTARALRDTDLAAQQLLVQVSDNGDPPLSTTVTITVTLEEVALEENYKPRDFLAGAKEK
PDLTLYLIIALAAVSTVALATVTLL
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
gagcggatagatcgggaggagctctgcggagcactctctccctgctccctcagctttgaa
atcgtggtggaaaacccgctggagctgtacagcggcgccgtggagattcaagacatcaat
gataacgacccggtttttcccagcagccaggcgaggttggaaattagcgagtcagtggcg
ggcggggggcgcgcgccgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngaccccgatgtg
gggattaactctttgcagacctaccaactcagcgccaacccacacttcgcgctcgacgtg
cagacgagggtggatggcagcaagtacgcggaactggtgctagagaaggagctggacagg
gaggagcaacgggagctgcacttggtcttgactgcgctggatgggggcagcccgccacgg
tcggcccacgtgcagatccacattgacgttgtggacgccaacgataatgccccagtcttc
aaccagtccacctacaaggcaagtgtaagggagaacacgcccagtggtaccctggttgcc
aggatcagtgcgtacgatctggatgatgggcccaatggagacatcgtctattccttcagc
agccacactccagccaaggtacgagaactttttgctctggactcagccacgggggagttg
agggtcaaaggacagctggactatgaagaaacaaagctgtatgagatttacttacaggct
aaagacaaaggtgccgttcctggtgtggctcattgcaaagtgctggtggaagttgtggat
gtgaatgacaacactccagaggtgacagtgacttctgtgtacagccctgtgcctgaagat
gcagccccagggaccgtcgtagctctgctcagtgtaacagacttggactcccatgataat
ggtctggtgaactgcctcatttctcctgggatcccattcatgctcagctcctctctcaaa
aattactacaccttgaaaacaaaagcagctctggaccgggaaaaggcatcagagtataac
atcactatcacagccagggactcaggctcaccaccattgtctgcggtaaaacagatcctg
gtgcaggtgtcagatgtcaacgacaacgcgcccaagtcttcccaggactcctatgacgtc
tatgtgctggagaacaatgtgcctggcatccccatccttaatgtgagtgccacagacccg
gaccttgggcgcaatgctcatctctcctataccctcttgcagggtgatcccactgtaggc
cacatcttctccatcaaccgtgagaatggcaccctctacctgctcacttccctggaccac
gaggaccaggtggagttcagcatgatggtgcaggtccaggatggcggctctccgcctctg
gccaccaatgtctcagtcagtgtgtttgtcactgacctcaatgacaatgctccaaccgtg
ctgtaccctcaccccaacaccaccaccacctataccgatgtggtggcaccaggcactgct
gctgggcacatggtcactaaggtggtggcagtggacgcagatgcagggtacaatgcctgg
atctcttataccctgttgcaggccactgatcccagcctcttctcagttgggctgcacaac
ggggagatcttcacagcccgtcagctccgggaggatgatgctccccaacatacactagtt
atcctgctgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctgccagtgccactgtctcc
atatctgtggccgagatggtgaaggaggtgctcactgacctcactgatgtggcacctgct
aatgatcccaggaggcatgtgactttctatctcatcctggctgtgattttggtgtcagca
gctttcttcatcaccatgttgtcggtgggcatcttcaagtgctacaagtggaggcagtca
aaggaactgtttaacagctccagaagcaccctatacaggacaccagggcccttccaccac
attgatgctgtgcggggcggcctcacgccacccaacttctaccaccaggtctatctcacc
acggactctcgccagagtgatctcctgtgtaaaaagcccttcacttccagccccctgggg
agccgccagagcaccatgaggaatggtgagccagggctgtaccaccagattgtgggcact
gccacgcggctccccacacctgccgagcaccgcaccctgcgcatcgccgagtctgccaca
gtggctgcgcgcttccccctggagagtgcgcaggaccctgatgtgggcaccaatgctgtg
ggctcctaccggctgagccccaactcccacttctccctggacgtcaagcagcagcaggat
ggcaaactcttcccggagctgctggtgctggagcgtgctctggaccgggaagagcagcca
gaactgcagctggtgctgacggccatggatgggggaagcccagcccgctcgggcacggcg
cagataacggtcctggtcctagatgtcaatgacaatgcacccacctttgaccgtgccaca
tacaaggtacaagtcccagaaaacacacctgtgggggccctgctcctccagctcaatgca
tctgaccccgacgagggccccaatggggagacgcagtactcattcggggttcatacctct
gactcggtccggaggctctttgccctggatccccgcagcggtgaggtccgggtgagtggt
gccctagactttgaggaatcacctttctatgagatctatgtgcgagcccatgatggtggg
gtcccagaaatggagggccactgttccctgcggaacccggtgccagaagacaccccactg
gagactgttgtggggcttttcaacgtacgggaccgagactcaggggccaatgggtacgtg
agtttggagatctcccctgatgtgcctttcaccatcaggtcccttcagaaccatttctcc
ctggtcacccgggaaagcctggaccgagagtccacctcacagtacgtagtggagctgatt
gcccaggatggtgggtcccccatccttaccacaacgctcacgctgctcctcaatatatct
gacgtgaatgacaaccctccacgcttctcgcagccctcctacgatgctttcatcctggag
aacaacccacctggctccctgctgtgcactgtctctgcctcggaccctgacgatggggat
aattctcgtcttgtttactccatagaaagcggccaagtgcagggtgcccccacctcttcc
tttgtccacatcaatcctgacaatggcaacctctatgctcagcggacctttgacttcgag
ctgctgcaggttctgccggtctctgtggctgtgcgggactcggggtcccccccgctccac
gccaacgttactgtctacatctttgtgctggatcagaatgaccacccccccaccatcctg
caccctgccagtgacatcccggcaccccagagggttccgctgtctgccccaccgggctac
ctggtcaccaaggtgacagcagtggatgcagatgccgggcacaacgcctggctctcatac
caactgctgccgcagtccactgacccgtccttgttccacatgtcgctgtacaccggggag
gtgcggacagcgcgtgccctccgggacaccgacctggccgcacagcagctccttgtccag
gtgtcggacaatggcgacccaccgctctccaccactgtcaccatcaccgtgaccctggag
gaggtggccctggaggagaactacaagcctcgggatttcctggctggtgccaaggagaag
ccggacctgaccctctacttgatcatcgcgctggcagctgtcagcaccgtagcgcttgcc
actgtcaccctcctg
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