Balearica regulorum gibbericeps (East African grey crowned-crane): 104640537
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Entry
104640537 CDS
T09009
Symbol
DDX58
Name
(RefSeq) probable ATP-dependent RNA helicase DDX58
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg04622
RIG-I-like receptor signaling pathway
breg04623
Cytosolic DNA-sensing pathway
breg05164
Influenza A
breg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
104640537 (DDX58)
04623 Cytosolic DNA-sensing pathway
104640537 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104640537 (DDX58)
05168 Herpes simplex virus 1 infection
104640537 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
breg04054
]
104640537 (DDX58)
Enzymes [BR:
breg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104640537 (DDX58)
Pattern recognition receptors [BR:
breg04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
104640537 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
RIG-I_C-RD
DEAD
ResIII
Helicase_C
AAA_19
AAA_25
AAA_22
Motif
Other DBs
NCBI-GeneID:
104640537
NCBI-ProteinID:
XP_010307261
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
DGKDVDGEVTDASENSFETMITFSEEAEPDNNLSENLCSASEEIYQPSPIYEPKAVRSYQ
IELAQPAIDGKNTLICAPTGSGKTFVALMICEHHFQNMPAGRKAKVVFLATKVPVYEQQK
NVFKQHFERSGYSVQGISGETVANVSVEKVIQNSDIVVLTPQILVNSIEEGILSSLSIFT
LMVFDECHNTTGNHPYSVLMTRYLQQKFDSSANQLPQIVGLTASVGVGNAKSIKETIEHI
CTLCSYLDIQAISTVRENKEDLQRFGNKPEMHVRWVKMQVQNHFADIISGLMSETEELMR
KIYSVDNISQINKNDFGTQKYEHWIVATQKKCRLLQLADKEKESSLCRDLFICTEHLRKF
NDALIISEDARIEDALFYLTEFFINVKNGPYTELEKQLTAKFQEKEPELIALSKDESNEN
PKLEELACILDEAYRYNPQTRTLLFAKTRALVAALKKWIEANPLLNHIKPGVLMGRGRRD
QKTGMTLPMQKGVLDAFKTNKDSRLLIATSVADEGIDISECNLVVLYEYFGNVTKMIQVR
GRGRARDSKCILVTNKKEVVDNEKQNRYKEEMMNEAIEELQNWDETTFARKIHDLQMKEK
VLRDSSKKDTRCKAVEGKKNLLCGKCKAYACSTDDIRVIKESHHTVLGDAFKERYITKLH
QKPVRFDCFEKKSKMHCQNTNCQHDWGIIVKYKTFDDLPVIKIKSFVVENVETGAQMDFQ
KWKDINFSLKNFDEETSS
NT seq
2219 nt
NT seq
+upstream
nt +downstream
nt
aagatggcaaagatgttgatggtgaagtgacagatgcctctgagaacagctttgaaacca
tgataacgttttctgaagaagcagaacctgataataatctcagtgaaaatctctgttcag
cttcagaagaaatctatcagccttcacctatttatgaaccaaaggcggttcggagctacc
agattgaacttgcgcagcctgctatcgatgggaaaaacacattgatatgtgcccccacag
gatctggaaaaacttttgtggcacttatgatttgtgaacatcatttccaaaacatgcccg
caggacgaaaggcaaaagttgttttccttgcaactaaagtgccagtgtacgaacaacaga
aaaatgtattcaagcagcattttgaaagaagtggatattctgttcaaggaattagtggtg
aaacagttgcaaatgtctctgtagaaaaggttatacagaacagtgacatcgttgtgctga
cgccccagattcttgtgaatagcattgaggaagggatccttagctccctgtccatcttca
ctctgatggtatttgatgagtgccacaacactacaggcaaccacccttacagtgtgttaa
tgaccagatacctgcaacaaaaatttgactcctctgcaaaccagctgcctcagattgtag
gtttaactgcttctgttggagttggtaatgccaagagcatcaaggaaacgatagagcaca
tctgcaccctctgctcctaccttgacatacaggccatatccactgtcagagagaacaaag
aggatctgcagagatttggaaacaagccagaaatgcatgtcagatgggttaaaatgcaag
ttcagaatcactttgcagacattatctcaggtctgatgtctgagacagaggagttgatga
ggaagatttactcagtggataatatctctcaaatcaacaagaatgattttggaacacaga
aatatgagcactggatagttgccactcagaaaaaatgcagactgttgcaactggcagata
aagagaaggagagcagcctttgtagagaccttttcatttgcactgaacacctgcggaaat
tcaacgatgctctcatcatcagtgaagatgcccgcattgaagatgctttattctacctaa
ctgaatttttcataaatgtcaaaaatggaccatatacagagttagagaagcaactgacag
ccaaatttcaagagaaagaaccggaactgattgccctttcaaaagatgaatcaaacgaga
atcccaagctggaagagcttgcctgcatcctggatgaagcataccgctataacccacaga
ctcgcactcttctctttgctaagacaagagccttagtagctgctctgaagaaatggatag
aagcaaaccctctacttaaccacataaagccaggtgtgttgatgggtcgtggaagaagag
atcaaaaaacaggtatgaccctcccgatgcagaagggtgtactggatgcattcaaaacca
acaaagacagcagactgctaattgctacatctgttgctgacgaaggcattgatatttctg
agtgcaaccttgttgtgctctacgaatacttcggtaatgtcaccaaaatgatccaagtga
gaggtcgtggaagggcaagagacagcaagtgcatccttgtgacaaacaaaaaagaagtgg
ttgacaatgagaaacagaaccgttataaggaagaaatgatgaatgaagctattgaagagc
tacagaattgggatgaaacaacatttgcaagaaagatacatgacctgcaaatgaaggaaa
aggtattaagagattccagcaagaaagacacaagatgtaaggcagtggaaggaaaaaaaa
atcttctctgtggaaaatgcaaagcatatgcctgcagtacagatgacatcagagttataa
aggaatctcatcacactgtcctaggagatgcgttcaaggaacgttatataacaaagcttc
accagaaaccagtccggtttgactgttttgagaaaaaaagcaagatgcattgccaaaata
ctaattgccagcatgactggggaatcatagtaaagtacaagacatttgatgatctaccag
tgatcaaaatcaaaagcttcgtagtagagaacgttgaaactggggcacaaatggattttc
agaaatggaaagatattaatttttcattgaagaattttgatgaagaaacgtccagctga
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integrated database retrieval system
