Brevundimonas sp. NIBR11: KKHFBJBL_02812
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Entry
KKHFBJBL_02812 CDS
T10976
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bren Brevundimonas sp. NIBR11
Pathway
bren03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bren00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KKHFBJBL_02812 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bren03400
]
KKHFBJBL_02812 (nth)
Enzymes [BR:
bren01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KKHFBJBL_02812 (nth)
DNA repair and recombination proteins [BR:
bren03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KKHFBJBL_02812 (nth)
Prokaryotic type
KKHFBJBL_02812 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
IMS_HHH
RecR_HhH
Ogg-HhH
HHH_5
H2TH_5
Motif
Other DBs
NCBI-ProteinID:
WGM32559
LinkDB
All DBs
Position
complement(2814282..2815016)
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AA seq
244 aa
AA seq
DB search
MARPAKPKAAVKPPARKAGSVMTGAPIPIFAFPPDEDRVEEIFVRLARVMPKPKTELSFT
DPFTLVVAVALSAQATDVSVNKATDRLFAVADTPAKMLALGEAGLVPYIASIGLYRNKAK
NVIALSRIVLEQHGGVVPLNRTDLQALPGVGRKTASVVLNELGIEPAIAVDTHVFRVSHR
LGLANAATTDKVEDQLHRIVPEAYLPKAHHWLILHGRYTCTARKPNCAGCMINDLCPARG
LMAA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtggccagacccgccaagccgaaggccgccgtgaagccgccggcccgcaaggccggcagc
gtcatgactggcgcgccgatcccgatcttcgcctttccgcccgatgaggatcgcgtcgag
gaaatcttcgtccgcctggcccgcgtcatgccgaagcccaagaccgagctcagcttcact
gaccctttcacacttgtcgtcgccgtcgccctgtccgcccaggcgaccgacgtctcggtc
aacaaggcgaccgaccggctgttcgccgtcgccgacacgccggcgaagatgctggccctg
ggggaggcggggctggtcccctacatcgcctccatcggtctctatcggaacaaggcgaag
aacgtcatcgcgctcagccgcatcgtgctggagcagcacggcggcgtcgtgcccctgaac
cgcacggacctgcaggccctgcccggcgtgggccgaaaaacggccagcgtcgtcctgaac
gaactcggcatcgagccggccatcgcggtggacacccatgtcttccgcgtttcgcaccgg
ctgggtctggccaacgccgcgacgaccgacaaggtcgaggaccagctgcaccggatcgtg
cccgaggcctatttgcccaaggcccaccactggctgatcctgcacggccgctacacctgc
acggcccgcaagccgaactgcgccggctgcatgatcaacgacctgtgcccggcgcgggga
ctgatggcggcctaa
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