Brevundimonas sp. 'scallop': E4341_00340
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Entry
E4341_00340 CDS
T09204
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bres
Brevundimonas sp. 'scallop'
Pathway
bres03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bres00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E4341_00340 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bres03400
]
E4341_00340 (nth)
Enzymes [BR:
bres01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
E4341_00340 (nth)
DNA repair and recombination proteins [BR:
bres03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E4341_00340 (nth)
Prokaryotic type
E4341_00340 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
IMS_HHH
RecR_HhH
Ogg-HhH
HHH_5
H2TH_5
Motif
Other DBs
NCBI-ProteinID:
QIF80250
LinkDB
All DBs
Position
complement(72283..73026)
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AA seq
247 aa
AA seq
DB search
MKPAKAKKPAAKPAKRPAVMTGAAIPVLRWPPDEDRVEAIFERLSGVMPEPKTELDFSNP
FTLVVAVALSAQATDVSVNKATERLFKVADTPEKMLALGEEGLIPYIASIGLYRGKARNV
IALSRIVLEQHGGEVPLNRADLQALPGVGRKTASVVLNELGIEAAIAVDTHVFRVSHRLG
LANAGTPDKVEAQLFKVVPEDWLPKAHHWLILHGRYTCTARKPKCLSCIIADLCPSRAGL
MGLGETG
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccgccaaggccaaaaaacccgccgccaagcctgccaaacgcccggccgtgatg
accggggcggccattcccgtgctgcgctggccgcccgatgaggaccgtgtcgaggcgatc
ttcgaacgcctgtccggcgtcatgccggagcccaagaccgagctggatttctccaatcct
ttcaccctcgtcgtcgccgtcgccctgtcggcccaggccacggacgtctcggtcaacaag
gcgaccgagcggctgttcaaggtcgcggacacgccggagaagatgctggccctcggcgag
gaggggctgatcccctacatcgcctccatcggcctttatcgcggcaaggcgcggaacgtc
atcgcgctgagccgcatcgtgctggagcagcatggcggcgaggtcccactcaaccgcgcc
gatcttcaggccctgcccggcgtgggtcgcaagacggcctcggtggtcctgaacgagctg
gggatcgaggcggccatcgccgtggacacccacgtctttcgcgtctctcaccggttgggc
ttggccaatgccggaacgccggacaaggtcgaggcccagctgttcaaggtcgtgccggag
gactggctgcccaaggcgcaccactggctgatcctgcacggccgctacacctgcacggcg
cgaaagcccaaatgcctatcctgcatcatcgccgacctgtgcccctcgcgggcgggcctg
atggggctgggcgagacgggctag
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