Mycetohabitans rhizoxinica: RBRH_03261
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Entry
RBRH_03261 CDS
T01355
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
brh
Mycetohabitans rhizoxinica
Pathway
brh00300
Lysine biosynthesis
brh00550
Peptidoglycan biosynthesis
brh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RBRH_03261
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RBRH_03261
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
brh01011
]
RBRH_03261
Enzymes [BR:
brh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
RBRH_03261
Peptidoglycan biosynthesis and degradation proteins [BR:
brh01011
]
Precursor biosynthesis
Amino acid ligase
RBRH_03261
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
DUF2694
Mur_ligase
Metal_resist
Motif
Other DBs
NCBI-ProteinID:
CBW73834
UniProt:
E5ALF9
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All DBs
Position
292889..294421
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AA seq
510 aa
AA seq
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MSRSPLTPEQIERVRAEVLAWLRARLAPHAQLRVDSRAVCAGDAFVAYAVDSADSRAYIA
DALQRGAAAVLVQAGGEFPGGGPVLQVPELDQLAGHIASAWYGEPSRDMLMVGITGTNGK
TTTSHWVAGALSGSGTRCAIIGTLGTGLPGQLSPTGFTTPDAPQVHHSLAALRAHGASAV
SMEVSSHALHQGRVNGVAFDIAVFTNLTQDHLDYHKDLASYEAAKARLFDWPGLRAAVIN
RDDEAGRRLIGHLATRVRTISYGIASTRPRGDASLHAMAIRATATGTAFTVVSDWGHAEL
EVGTLGLFNVANLLAVLGVLLAADVPFDAALSQITRLEPVNGRMQQLGGRPQVDEPLVVV
DYAHTPDALEKTLDALRPIATQRGGKLVCVFGCGGERDATKRPLMGAIAERLADSVIVTS
DNPRSEPPLAIIGQIVSAMREPARVRTIEDRAGAILQAVRGASAADVVLIAGKGHEATQE
VMGKKRPFSDQDHAHLALASRVTQPRGEAE
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgctcgccactgacgcccgaacaaatcgagcgcgtgcgggccgaggtgctcgcg
tggctgcgcgctcggcttgcgccgcatgcgcaattgcgggtggacagccgcgcggtgtgc
gctggcgacgcgttcgtcgcgtatgcggtggacagcgcagacagtcgtgcgtatatcgcc
gatgcgttgcagcgtggcgcggcagccgtgctggtccaggccggcggtgagttcccgggc
ggcggaccggtgctccaggtccctgaactcgatcagcttgcgggccacattgctagtgcg
tggtatggcgagccgagtcgcgacatgctgatggtcggcatcacgggcaccaatggcaag
accaccaccagccactgggtcgcgggcgcgttgagcggcagtggcacccgttgcgcgatc
atcggcacgttgggcaccggactgccggggcagctttcgcccaccgggttcacgaccccc
gacgcgccgcaggtgcaccacagcctggcggcgctgcgtgcgcacggcgcaagcgcggta
tcgatggaggtgtcctcgcacgcactgcaccaggggcgcgtgaatggcgtcgcgttcgac
atcgcggtgttcactaacctgacgcaggaccatctcgactatcacaaggacctcgcgtcg
tacgaggccgccaaagcgcggctgttcgactggccgggcttgcgcgcggcagtcatcaat
cgcgacgacgaggccgggcgcaggctgatcgggcatctggccacgcgggtgcgcacgatt
tcgtacggtatcgcgtcgactaggccgcgcggcgacgcttcgctgcatgcgatggcgatc
cgcgcgaccgccaccggcaccgccttcacggtggtatccgactgggggcacgccgagctc
gaagtgggcacgctcggcctgttcaatgtcgccaatttgctcgccgtcctcggcgtgcta
ctggccgccgacgtgccattcgatgcggcgctgtctcagatcacgcggctggaaccggtc
aacggtcggatgcagcagctcggcgggcggccgcaagtggacgagccgctggtggttgtc
gattacgcgcatacgccggacgcattggaaaaaacgctcgacgcactgcggccgatcgcc
acgcagcggggcggcaagctcgtctgtgtgttcggctgtgggggcgagcgcgatgcgacc
aagcggccgctgatgggggcgattgccgagcggctcgccgacagcgtcatcgtgacgagt
gacaacccgcgtagcgagccgccgctggcaatcatcggccaaatcgtcagtgcgatgcgt
gagccggcacgcgtgcgcaccatcgaggatcgcgctggcgcgatcctgcaggcggtgcgt
ggtgcgtcggccgccgacgtcgtgctgatcgccggcaagggacatgaggcaacacaggaa
gtgatgggtaagaagcggccgttttcggatcaggatcatgcacacctcgcgctcgcatcg
cgcgtcacgcaacctcgcggagaagctgaatga
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