Buceros rhinoceros silvestris (rhinoceros hornbill): 104492214
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Entry
104492214 CDS
T08612
Symbol
THBS1
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi04115
p53 signaling pathway
brhi04145
Phagosome
brhi04148
Efferocytosis
brhi04350
TGF-beta signaling pathway
brhi04510
Focal adhesion
brhi04512
ECM-receptor interaction
brhi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
104492214 (THBS1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104492214 (THBS1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104492214 (THBS1)
04148 Efferocytosis
104492214 (THBS1)
09143 Cell growth and death
04115 p53 signaling pathway
104492214 (THBS1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
104492214 (THBS1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104492214 (THBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brhi04131
]
104492214 (THBS1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
brhi00536
]
104492214 (THBS1)
Membrane trafficking [BR:
brhi04131
]
Endocytosis
Phagocytosis
Opsonins
104492214 (THBS1)
Glycosaminoglycan binding proteins [BR:
brhi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104492214 (THBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
VWC2L_2nd
cEGF
EGF_3
TSP1_ADAMTS
Laminin_G_3
TSP1_CCN
EGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
104492214
NCBI-ProteinID:
XP_010133035
LinkDB
All DBs
Position
Unknown
AA seq
1211 aa
AA seq
DB search
MGPTAVLLLLLMLGVSETKRSAESRSDDDSVFDLFELIGYIRKGAGRRAPGVYLVKGPES
SSPAYRIEDASRIPAVPDAKFQDLLDAIHAEKGFILLATLRQAKKSRGTLLSVEQKDGSG
HVFSLVSNGKAGTLDLSLSGDGKQQLVSVEDALLATGHWKNITLFVQEDRAQLYVGCEKM
ENAELDIPIQNIFTRDLASSARLRIAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGCSS
STSAIITLDNPINGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVELQGLRSMVTTLQ
DRVRKVTEENELIAKVVQITPGVCIHNGILHKNKEEWTIDSCTECTCQNSATICRKVSCP
LMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCE
GSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGIITRIRLCNSPVPQLNGKPC
EGEARENKSCQKDPCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKTCVGE
ARGTQVCNKQDCPIDGCLSNPCFAGTTCTSSPDGSWKCGACPAGYHGDGVHCQDIDECKE
VPDACFVFNGQHRCENTEPGYNCLPCPPRFTGTQPFGRSVEDAMANKQVCKPRNPCTDGT
HDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCK
KDNCPNLPNSGQEDYDKDGIGDACDNDDDDDGIPDDRDNCPFIYNPQQYDYDRDDVGDRC
DNCPYNHNPDQIDTDNNGEGDACAVDIDGDGVLNELDNCQYVYNVDQRDTDLDGVGDQCD
NCPMEHNPDQEDTDSDRIGDQCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDAC
DHDDDNDGIXXXKHSCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENVEISE
TDFRRFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFFI
NTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGPGE
HLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWHLSHRPKTGYIRVVMYEGKKIMAD
SGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDENTALYSIRGEPDQLLDYTGQDRYP
KTDFPGGRGKE
NT seq
3634 nt
NT seq
+upstream
nt +downstream
nt
atggggccgacggccgttctcttgctcctcctcatgctcggtgtctcggagaccaagcgc
tccgcagagtcccggagcgatgatgacagcgtctttgatctctttgaactcattggctac
attcggaagggagctggacgccgggcacccggggtgtacctggtgaagggaccagaatcc
tccagccctgcttaccgcattgaagatgccagtcgcatccctgctgtccctgacgccaag
ttccaagacttattagatgccatccatgctgagaagggcttcatcctcctggccactctc
cggcaagccaagaagagtagaggcacgctgctgtccgtggaacagaaagatggctctggt
cacgtcttcagtctagtgtctaatggcaaggcaggcaccctggacctgagcctttctggt
gatggcaagcagcagttagtgtcagtagaggacgccttgctagctacaggacactggaag
aatatcaccctgtttgtgcaggaagaccgggctcagctctacgtggggtgtgagaaaatg
gagaatgctgaactggacatccccatccagaacatcttcactagggacctggccagcagt
gccaggctccgtattgccaaagggggagtcaatgacaacttccagggactgctgcagaat
gtgcggtttgtgttcggaacgaccctggaaacgatcctgaggaacaaaggctgctccagc
tccactagtgccatcattactctggacaaccccatcaatggttccagcccagctatccgc
acgaattacatcggccataaaacaaaggacatccaagcggtctgtggtttttcctgcgat
gaactaacaaacatgtttgtggaactgcaagggctccggtccatggttaccacactccaa
gacagagttcgcaaagtgactgaagaaaatgaactcattgccaaagtggtccagataact
cctggagtatgcattcataatggaatcttgcacaaaaataaagaagagtggactattgac
agctgcacggaatgtacctgccagaactctgccactatatgccggaaagtgtcctgtcct
ctcatgccttgttccaatgccactgtacctgacggggagtgctgcccgcgatgctggcct
agcgactacgcagatgatggatggtctccttggtctgaatggacttcctgttctgtgacc
tgtgggaatggtattcagcagagagggcggtcctgtgacagtctcaataaccgctgtgaa
gggtcgtctgtacagactcggacctgccacctgcaggagtgcgataagagatttaaacag
gatggtggctggagtcactggtcaccgtggtcatcatgttctgtcacttgtggcacgggc
atcatcaccagaattcgcctctgcaactctccagtaccgcagctgaacggcaaaccctgt
gagggtgaggcaagagaaaacaaatcctgccagaaagatccttgcccaattaatggcaac
tggggaccatggtctccgtgggatgcttgcacagtgacatgtggaggaggactgcaaaaa
cgtagccgtctctgcaataatcctgagccgcagtatggtgggaagacttgcgtaggtgaa
gctagagggactcaggtctgcaacaaacaggactgtccaatcgatgggtgtctgtccaat
ccctgctttgcggggactacatgtaccagctcccctgacggttcctggaagtgtggtgcc
tgtcctgctggctaccatggtgatggtgtccactgccaggatattgatgagtgcaaagag
gttcctgatgcctgcttcgtcttcaacggacagcacaggtgcgagaatactgaacctggg
tacaactgtctgccttgtccaccccgtttcactgggacgcagccgtttggtcgcagtgtt
gaggatgccatggctaacaaacaggtctgcaagccacgtaatccatgcacagatggaaca
cacgactgcaacaagaacgccaaatgcaattaccttggccacttcagtgaccccatgtat
cgctgcgaatgtaaaccaggctatgctggcaacggcatcatctgtggagaagacactgac
ctggatggatggccaaacgagaaccttgtttgtgttgccaatgccacttaccactgtaaa
aaagataactgccccaacctacccaactctgggcaggaagactatgataaggatgggatt
ggtgatgcctgtgacaatgatgacgacgatgatggtattccggatgaccgggacaactgt
ccgttcatctacaacccacagcagtacgactatgacagagatgatgttggtgaccgctgt
gacaactgcccctacaatcacaaccctgatcaaatcgatactgacaacaacggagaagga
gatgcgtgtgccgtggatattgatggagatggggtccttaatgaactggacaactgtcaa
tatgtctacaatgtagaccagagggatacagacttggatggcgttggcgatcagtgtgat
aactgtccaatggagcacaatcctgaccaggaagacactgattctgaccgcataggtgac
cagtgtgacaacaaccaggacatagatgaagacggccatcaaaataaccttgataactgc
ccctatgtgcccaatgccaatcaagctgaccacgacaaagatggaaaaggtgacgcctgt
gaccacgacgatgacaatgacggcattnnnnnnnncaaacatagctgcagattggttgcc
aacccagatcaagctgattcagatggtgatggacgtggagatgcttgcaaagatgacttt
gaccaagacagtgtgccagatattgatgatatctgccctgaaaacgtggagattagtgag
actgatttccgaagatttcagatgattcccctggatcccaaaggaacatcccaaaatgat
cccaactgggttgttcgtcaccagggtaaagaactggttcagacagtcaactgtgaccct
ggccttgcagtcggttttgatgaattcaacgctgtggatttcagtggcaccttcttcatc
aacaccgaaagggatgatgattatgctggctttgtatttggctaccaatctagcagtcgc
ttctatgtcgtcatgtggaagcagatcacccagtcttactgggactccacaccaaccaaa
gctcaaggctactcaggtctctccatcaaagttgtgaattctaccaccggtccaggagaa
caccttcgtaatgctctgtggcacacaggaaacacccctggccaggtaagaactttgtgg
cacgaccctcgccacataggctggaaagatttcactgcatacagatggcatcttagccac
agaccaaagactggttacatcagggttgtaatgtatgaagggaagaaaatcatggcagac
tcgggaccaatttatgataaaacctatgctggcggtcggctaggattatttgtcttctcc
caagaaatggtgttcttctcagatcttaaatatgaatgcagagatgaaaacacagccttg
tactctattcgaggtgagcctgatcagctgctcgattacacaggacaagacagatatcct
aaaaccgatttccctggtggaagggggaaagagg
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integrated database retrieval system
