Buceros rhinoceros silvestris (Rhinoceros hornbill): 104494917
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Entry
104494917 CDS
T08612
Symbol
DDX58
Name
(RefSeq) probable ATP-dependent RNA helicase DDX58
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
brhi
Buceros rhinoceros silvestris (Rhinoceros hornbill)
Pathway
brhi04622
RIG-I-like receptor signaling pathway
brhi04623
Cytosolic DNA-sensing pathway
brhi05164
Influenza A
brhi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
104494917 (DDX58)
04623 Cytosolic DNA-sensing pathway
104494917 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104494917 (DDX58)
05168 Herpes simplex virus 1 infection
104494917 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
brhi04054
]
104494917 (DDX58)
Enzymes [BR:
brhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104494917 (DDX58)
Pattern recognition receptors [BR:
brhi04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
104494917 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
RIG-I_C-RD
DEAD
ResIII
Helicase_C
AAA_19
AAA_22
AAA_25
PhoH
Motif
Other DBs
NCBI-GeneID:
104494917
NCBI-ProteinID:
XP_010136120
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
NGKDVDGDMTDGSENSFETTVTFSEEAEYDNLSENLCSDSEGIYQSSPVYESKKARNYQT
ELAQPALNGKNTLICAPTGTGKTFVALMICEHHFQNTPSGQKAKVVFFATKVPVYEQQKN
VFKQHFERSGYSVQGISGETVANVSVEKVIQDSDIIVLTPQILVNTIEQGILSSLSIFTL
MIFDECHNTTGNHPYNVLMTRYLEEKFDSCANQLPQIVGLTASVGVGSAKTVRETVEHIC
TLCSYLDIQTISTVRVNKEELQRFRNKPETYVRWVKMRVQNPFADVISGLMSETQELMRK
IFSVGTMSQIKKNYFGTQQFEHWIVATQKKCRLLQLADKEKESSVCRDLFICTEHLRKFN
DALIISEDARIEDALAYLTEFFTNVKNGPYTELEKQLTAKFQEKEPELTALSQDESNENP
KLEELACILDEAYRYNPQTRTLLFAKTRALVAALKKWIEANPLLSHIKPDMLMGRGRKDQ
KTGMTLPMQKDILDAFKTNQDIRLLIATSVADEGIDISECNLVVLYEYFGNVTKMIQVRG
RGRAKDSKCIIVTSKTEVVENEKQNRYKEEMMNEAIEELQNWDETRFARKIRDLQMKEKV
LRDARKKEIRHQVVEGKKNLLCGKCKAYACSTDDIRVIKASHHTVLEDAFKERYITKPHR
KPVQFDCFEKKSKMHCRNTNCQHDWGIIVKYKTFDNLPVIKIKSFVVENVETGTQMDFQK
WKNINFSLKNFDDEESSR
NT seq
2219 nt
NT seq
+upstream
nt +downstream
nt
gtaatggcaaagatgttgatggtgatatgacagatggctctgagaacagctttgaaacca
cagtgacattttctgaagaagcagaatatgataatctcagtgaaaatctctgttcagatt
cagaagggatttatcagtcttcacctgtttatgaatcaaagaaggctcggaactaccaga
ctgaacttgcacagcctgctctcaatgggaaaaacacactgatatgtgcccccacaggaa
ctggaaaaactttcgtggcacttatgatttgtgaacaccatttccaaaacacaccctcag
gacagaaggcgaaagttgtcttttttgcaaccaaagtgcccgtgtacgaacagcagaaaa
atgtatttaagcagcattttgaaagaagtggatactctgttcaaggaattagtggtgaaa
cagttgcaaatgtctctgtagaaaaggtcatacaagacagtgacatcattgtgctaacac
cccagattcttgtgaacaccattgagcaagggatccttagctccctctccatcttcactc
tgatgatatttgatgagtgccacaacactacgggcaaccacccttacaatgtgttaatga
ccagatacctggaagaaaaatttgactcctgcgcaaaccagctgcctcagattgtaggtt
taactgcttcagttggagttggtagtgccaagaccgtcagggaaacagtggagcacatct
gtaccctctgctcctaccttgatatacagaccatatccacggtcagagtgaacaaagagg
agctgcagagatttcgaaacaagccagaaacatatgtcagatgggttaagatgcgagttc
agaatccctttgcagacgttatctcaggtctgatgtccgaaacacaggagttgatgagga
agattttctcagtgggtactatgtcccaaataaaaaagaattattttggaacacaacaat
ttgaacactggatagttgccactcagaagaaatgcagactgttgcaactggcagataagg
agaaggagagcagcgtttgtagagaccttttcatttgcactgaacacttgcgaaaattca
atgatgctctcatcatcagtgaagatgcccgcattgaagatgctttagcctacctaactg
aatttttcacaaatgtcaaaaatggaccatatacagagctagagaagcaactgacagcca
aatttcaagagaaagaaccagaactgactgccctttcacaagatgaatcaaatgagaatc
ccaagctagaagaacttgcttgcatcctggatgaagcataccgctataacccacagactc
gcactcttctctttgctaagacaagagccttagtagctgctttgaagaagtggatagaag
caaaccctctacttagccacataaagccagatatgttgatgggtcgtggaagaaaagatc
aaaaaacaggtatgacacttccaatgcagaaggatatactggatgcattcaaaaccaacc
aagacatcagactgctaattgctacatctgttgctgatgaaggcattgatatttctgagt
gcaaccttgttgtgctctatgaatactttggtaatgtcaccaaaatgatccaagtcagag
gtcgtggaagggcaaaagacagcaagtgcatcattgtgacaagcaaaacagaagttgttg
agaatgagaaacaaaaccgttacaaggaagaaatgatgaacgaagcaattgaagagctac
agaattgggatgaaacaagatttgcaaggaagatacgtgacctgcaaatgaaggaaaaag
tgctacgagatgccaggaagaaagaaataaggcatcaggtagtggaagggaaaaaaaatc
ttctgtgtggaaaatgcaaagcatatgcctgcagtacagatgacatcagagttataaagg
cttctcatcacactgtcctagaagatgcattcaaggagcgttacataacaaagcctcacc
ggaaaccagtccagtttgattgttttgagaaaaaaagcaagatgcattgccgaaatacta
attgccaacatgactggggaatcatagtgaagtacaagacatttgataatctaccggtga
tcaaaatcaaaagctttgtagtagagaatgttgaaactgggacacaaatggattttcaga
aatggaaaaatattaatttttctttgaagaattttgatgatgaagaatcatccagatga
DBGET
integrated database retrieval system
