Buceros rhinoceros silvestris (rhinoceros hornbill): 104495382
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Entry
104495382 CDS
T08612
Name
(RefSeq) protocadherin gamma-C3-like
KO
K16497
protocadherin gamma subfamily C
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
brhi04515
]
104495382
Cell adhesion molecules [BR:
brhi04515
]
Cadherins
Protocadherins
104495382
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Sde0182_C
RET_CLD1
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
104495382
NCBI-ProteinID:
XP_010136652
LinkDB
All DBs
Position
Unknown
AA seq
1206 aa
AA seq
DB search
PALAVARGRLRGRRLRVVSAGNKKYFGVDLTSGALLVSERIDREELCGALSPCSLSFEIV
VENPLELYSGAVEIQDINDNDPVFPSSQARLEISESVAAGARFPLESAQDPDVGVNSLQT
YQLSANPHFALDVQTRVDGSKYAELVLEKELDREEQRELHLVLTALDGGSPPRSAHVQIH
IDVLDANDNVPVFNQSIYKASVRENTPSGTLVARIRAYDLDDGPNGDIVYSFSSHTPAKV
RELFALDAETGELRVKGQLDYEETKLYEIYLQAKDKGVVPGVAHCKVLVEVVDVNDNTPE
VTVTSVYSPVPEDAAPGTVVALLSVTDLDSHDNGLVSCFISPGIPFMLSSSLKNYYTLKT
KAALDREKASEYNITITAKDSGSPPLSAVKEILVQVSDVNDNAPKTSQDSYDVYLPENNM
PGIPILNVSATDPDLGRNAHLSYTLLQSDPTVGHLFSINRENGTLYLLTSLDHEDQVEFS
MMVQVQDGGSPPLATNVSVSVFVTDLNDNAPTVLYPYPNTNSTYTDMVAPGTPAGHMVTK
VVAVDADAGYNAWISYTLLQATDPSLFSVGLHSGEIFTARQLREDDTPQHTLVILLKDHG
EPVLSASATVSISILDLNDNSPSFPTTHRTLRVAESATVAARFPLESAQDPDVGINAVSS
YRLSPNSHFSLDVKQQQDGKLFPELVLERALDREKQPELQLVLTAVDGGSPARSGTAQIT
VLVLDVNDNAPTFDRATYRVRVPENTPVGALLLRLNASDPDEGSNGETQYSFGVHTSDSV
QRLFTLDPHSGDVRVSGALDFEESPFYEIYVRAHDGGVPEMEGHCVLQVEVQDANDNPPE
VMLTSLMNPVPEDTPPETVVGLFNVRDRDSGANGDVSLEISSDVPFAIRSLQNHFSLVTR
DSLDRESTSQYVVELIAQDGGSPPLTSTLVLLLNVSDVNDNPPRFLQPSYDAFIPENNPP
GSLLCTVSASDPDNGDNSRLVYSIESSEVQGAPTSSFVHINPDNGNLYAQRTFDFEQLQV
LPVSVAVRDSGSPPLHANVTVYIFVLDQNDHAPTILHPASDRDVPAPQRVPLSAPPGYLV
TKVTAVDGDAGHTAWLSYRLLPQSTDPSLFHVSLYTGEVRTARALQDTDGTVQQLIVQVT
DNGDPPLSTTVTITVALEEAALEESYKPLDFLAGAKEKPDLTFYLIIALAAVSTVALATV
TVLAAR
NT seq
3617 nt
NT seq
+upstream
nt +downstream
nt
cccgccctggcggtggcccgcgggcggctgcggggacgccggctgcgggtggtgtctgcc
ggcaacaagaagtacttcggggtggacctgacgagcggcgcgctgttggtgagcgagcgg
atagaccgggaagagctctgcggcgcgctctctccctgttccctcagctttgagatcgtg
gtggaaaaccctctggagctgtacagcggcgccgtggagatccaagatatcaatgacaac
gacccggttttccccagcagccaggcgaggctggaaatcagtgagtcggtggcggccgga
gcgcgcttcccgctagagagcgcgcaagatcccgatgtgggtgttaactctttgcagacc
taccagctcagtgccaacccgcacttcgcgcttgacgtgcagacgagggttgatggcagc
aagtatgcggaactggtactagagaaggagctggacagggaggagcaaagggagctgcac
ctggtcttgactgcactggatggaggcagcccgccacggtcagcccatgtgcagatccac
attgacgtcttggatgccaatgataatgtcccggtcttcaaccagtccatctacaaggca
agcgtgagggaaaacacacccagcggtacccttgtcgccaggatcagagcatatgatctg
gatgatgggcccaatggagacattgtctattccttcagcagccacacacctgccaaggta
cgagaactctttgctctggatgcggagacaggggagttgagggtcaagggacagctggac
tatgaggaaacaaagctgtatgagatttacttacaggctaaagacaagggtgtcgttcct
ggtgtggctcactgcaaagtgctggtggaagtcgtggatgtgaatgacaacactccagag
gtgacagtgacttctgtgtatagccctgtgcctgaagatgcagccccagggacagttgta
gctctgctgagcgtaacagacttggactcccatgacaatggtctggtgagctgcttcatt
tcccctgggatcccattcatgcttagctcctccctcaaaaattactacacattgaaaaca
aaagcagctctggaccgagaaaaggcatcggagtataacatcactatcacagccaaggac
tcgggctcaccacccttgtctgcggtaaaagagatcctagtgcaggtgtcagatgtcaat
gacaatgcacccaagacttcccaggactcctatgatgtgtatctgccggagaacaacatg
cctggcatccccatccttaatgtgagtgccacagacccggaccttgggcgcaacgcccat
ctctcctataccctcttgcagagtgaccccactgtaggtcacctcttctccatcaatcgg
gagaatggcaccctctacctgctcacttccctggaccatgaggaccaggtggagttcagc
atgatggtgcaggtccaggatggtggctctccgcctctggccactaatgtctcagtcagt
gtgtttgtcactgatctcaatgacaatgccccaaccgtgctgtacccttaccccaacacc
aattccacctataccgatatggtggcaccaggcactcctgccgggcacatggtgaccaag
gtggtggcagtggatgcagatgcagggtacaatgcttggatctcctataccctgttgcag
gccactgaccccagcctcttctcagttgggctgcacagtggagagatcttcacagctcgc
cagcttcgggaggatgacactccccagcacacacttgtcatcctcctgaaagaccatggg
gagcctgtgctatctgccagtgctactgtctctatctctatcctggacctgaatgacaac
tccccgagcttccccaccactcaccgtaccctgcgcgttgctgagtctgccacagtggct
gcacgcttccccctggagagtgcacaggaccctgatgtgggcatcaatgccgtgagctcc
taccggctgagccccaactcccacttctccctggacgtcaagcagcagcaggatggcaaa
ctcttcccggagctggtgctggagcgtgctctggaccgggaaaagcagccagaactacag
ctggtgctgacagctgtggatggggggagcccagcccgttcaggcacagcgcagattact
gtcctggtcctggatgtcaatgacaatgcacccacctttgaccgtgccacatacagggtg
cgagtcccagaaaacacgcctgtgggggccctgctcctccggctcaacgcatctgaccct
gatgagggctccaacggggagacgcagtactccttcggggttcacacctccgactctgtc
cagaggctcttcactctggatccccacagtggtgatgtccgggtgagtggggcactggac
tttgaggaatcacctttctatgagatctatgtgcgagcccatgacggaggggtcccggag
atggagggccactgtgttctgcaggtggaagtgcaggatgccaatgacaaccccccagag
gtgatgctcacctcactgatgaacccggttccagaagacaccccaccagagactgttgtg
gggctcttcaatgtacgggaccgagactcaggggccaatggagatgtgagcttggagatc
tcctccgatgtgccttttgccatcaggtcccttcagaatcacttctccctggtcaccaga
gacagtctggaccgagagtccacctcacagtacgtagtggagctgattgcccaggatggt
gggtctcctcccctcacctcgacgcttgtgctgctcctcaatgtatctgatgtgaatgac
aaccccccacgcttcttgcagccctcctacgatgccttcatccctgagaacaacccgcct
ggctccctgctgtgcactgtatctgcttcagaccctgacaacggggataattcccggctt
gtttactccatagagagcagcgaagtgcaaggtgcccccacctcttcctttgtccacatc
aaccctgacaatggcaacctctatgctcagcgcaccttcgactttgagcagctgcaggtt
ctgccagtctctgtggctgtgcgggactcagggtcacccccactccatgccaatgttact
gtctacatctttgtgctggaccagaatgaccatgctcccaccatcctgcaccctgccagt
gacagggatgtcccagcaccccagagggtcccgttgtctgccccaccagggtacctggtc
accaaggtgacagcagtggatggggatgcggggcacaccgcctggctctcataccggctg
ctgccacagtccactgacccctccttattccacgtgtcactgtacactggggaagtgcgg
acagcgcgtgccctccaggacaccgatgggacagtgcagcagctcattgtccaggtgacc
gacaatggtgacccaccactttccaccactgtcaccattactgtggccctggaggaggca
gccctggaggagagctacaaacctctggatttcctggctggtgccaaggagaagccggac
ctgaccttctacctgatcattgcactggcagctgttagcacggtggcacttgccactgtc
accgtcctggctgcccg
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