Buceros rhinoceros silvestris (rhinoceros hornbill): 104495856
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Entry
104495856 CDS
T08612
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6 isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi04010
MAPK signaling pathway
brhi04120
Ubiquitin mediated proteolysis
brhi04140
Autophagy - animal
brhi04144
Endocytosis
brhi04620
Toll-like receptor signaling pathway
brhi04621
NOD-like receptor signaling pathway
brhi04622
RIG-I-like receptor signaling pathway
brhi05132
Salmonella infection
brhi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104495856 (TRAF6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104495856 (TRAF6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104495856 (TRAF6)
04140 Autophagy - animal
104495856 (TRAF6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
104495856 (TRAF6)
04621 NOD-like receptor signaling pathway
104495856 (TRAF6)
04622 RIG-I-like receptor signaling pathway
104495856 (TRAF6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104495856 (TRAF6)
09171 Infectious disease: bacterial
05132 Salmonella infection
104495856 (TRAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brhi04131
]
104495856 (TRAF6)
04121 Ubiquitin system [BR:
brhi04121
]
104495856 (TRAF6)
Enzymes [BR:
brhi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104495856 (TRAF6)
Membrane trafficking [BR:
brhi04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
104495856 (TRAF6)
Ubiquitin system [BR:
brhi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
104495856 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF6_Z2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-TRAF_2
zf-RING_5
SlyX
Med21
PspA_IM30
RING_XB3-XBAT31
TRAF3_RING
zf-RING_11
Sina_ZnF
Spc29
HAP1_N
DUF4455
U-box
CENP-F_leu_zip
UPF0242
ATG16
PUMA_CC
DUF1664
DUF16
CEP104_ZnF
HMMR_N
ADIP
Motif
Other DBs
NCBI-GeneID:
104495856
NCBI-ProteinID:
XP_010137192
UniProt:
A0A091H9E6
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MSLLYSDSSCGAREMEGGCCAAMASACSVGAKEDSVSSGAGNPPSSFAEETQGYDVEFDP
PLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPDNF
AKREILSLTVKCPNKGCGMKMELRHLEDHQLQCEFSTMECSQCQGAFPKNHLKEHMTQEC
PRRQVCCPNCVTSMAYEDKELHDQTCPLANVFCEYCNTVLIREQMPNHYDNDCPTAPVPC
FYSPFGCPEKMQRNELARHMQEFTQVHMRMMAQSFQNISVTATNPVPFINGLPFEPALFP
QVSHAPYDCNPEVENFKETIQQLEGRLVRQDHQIRELIAKMETQNTHMAELKRTIRNLEG
KITEMEAQQCNGIYIWKIENFSGLQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQLPN
AQRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELLAF
QRPTIHRNPKGFGYVTFMHLQTLKQRTFVKDDTLLVRCEVLTRLDFNSLRREGFQARSTD
GAV
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgttatatagcgatagcagttgtggagcccgagagatggaaggcggctgctgt
gcggccatggccagcgcctgcagcgtcggagccaaagaggacagcgtcagcagcggcgct
ggaaaccctcccagttcgtttgcggaggagacacaaggatacgatgtggagttcgatccg
cccttggaaagtaaatatgagtgtcccatctgtttgatggctctccgggaagccgtgcag
acaccgtgcggacaccgattctgcaaaggctgcattgtcaaatccatcagagatgcaggt
cacaaatgtccggtagacaacgaaattctgctcgaaaatcagctttttcctgacaacttt
gctaaacgggaaatcctttctttaacggtgaagtgtcccaacaagggctgcggtatgaag
atggagctgaggcatttagaggaccaccagttgcagtgtgagttctccaccatggaatgc
tcccagtgccaaggagccttcccgaagaaccacctgaaagagcacatgacacaggagtgt
ccaaggcgtcaagtctgttgtccaaactgtgtcacatccatggcctatgaagataaagag
cttcatgaccaaacctgcccgctcgccaatgtattttgcgaatattgcaacaccgtgctc
atcagagagcagatgcctaaccactatgacaacgattgccccactgccccggtgccgtgt
ttttacagcccctttgggtgtcccgagaagatgcagaggaatgaactggcacgacacatg
caggagttcactcaggtccacatgaggatgatggctcagagtttccaaaacatcagtgtt
acggccacgaatcctgttcccttcatcaacggcctcccctttgagcccgccctcttcccg
caagtgtctcatgccccgtatgattgtaatccggaagttgaaaacttcaaagaaactatt
cagcagttggaaggtcgtctggtaagacaggatcaccagatccgagaactcatcgcgaaa
atggagactcagaacactcacatggcagaactcaaacgcaccatccggaatctggagggg
aagatcaccgaaatggaggcgcagcagtgtaacggtatctatatctggaagattgagaac
ttcagcggccttcagaaggcccaggaagaagagagacctgtggtgatgcacagtcccggc
ttctacaccggaaagcccggctacaagctgtgtttgcgcctgcacatccagctcccgaat
gctcagcgctgtgctaattttatctctctgtttgtccacacgatgcaaggggagtacgac
agccatctgccttggcctttccagggcaccatacggctttctattctggatcaatccgaa
ggccccgagaggcagaaccatgaagaagtcatggaagccaagccggagttactggccttc
cagagacccaccattcaccgcaacccgaaaggttttggttacgtgactttcatgcacctg
caaaccttgaaacaacgaaccttcgtgaaggacgacacccttctggtgcgctgcgaagtg
ctcacgcggctggacttcaacagtctccgcagagaagggtttcaggctcgcagcaccgat
ggagctgtgtag
DBGET
integrated database retrieval system
