Buceros rhinoceros silvestris (rhinoceros hornbill): 104500042
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Entry
104500042 CDS
T08612
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi04514
Cell adhesion molecules
brhi04520
Adherens junction
brhi04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104500042 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
104500042 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
104500042 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
brhi01009
]
104500042 (PTPRF)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
brhi04515
]
104500042 (PTPRF)
Enzymes [BR:
brhi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
104500042 (PTPRF)
Protein phosphatases and associated proteins [BR:
brhi01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
104500042 (PTPRF)
Cell adhesion molecules [BR:
brhi04515
]
Immunoglobulin superfamily
Type II RPTP family
104500042 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Interfer-bind
V-set
C2-set_2
Ig_C17orf99
Fn3_PTPRU
Y_phosphatase
Insulin_TMD
DUF3377
TMEM154
ICAM_N
Motif
Other DBs
NCBI-GeneID:
104500042
NCBI-ProteinID:
XP_010141937
LinkDB
All DBs
Position
Unknown
AA seq
1470 aa
AA seq
DB search
MCTWSKKHPGPSAVALARSTRAGAGQSLASALGRKQRGKHVAQLTAVFRWQVPAEDCCGR
GAVFQHSPLPGAAALPTLLGEEEKSGFLPGKPTFMKAPEDQIGISGGVASFVCQATGEPK
PRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINTSAK
LTVLEEDHLPAGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTATSN
GRIKQLRSVSLGGTPIRGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRDQREVR
RVAPRFSIPPSNHEVMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMPVGRNVLELN
NIVQSANYTCVAISSLGMIEATAQITVKALPKPPTEPLVTETTATSVTLTWDSGNSDPIS
YYVIQYKPKSLEGQFQEVDGVATTRYSIGGLSPFSEYEFRVIAVNNIGRGPPSELVEART
GEQAPSSPPLKVQARMLSASTMLVQWEQPEEPNGQIRGYRVYYTTDPHLPLSMWQKHNTD
DSHLTTVGSLITGTTYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRI
LLTWLPASQERITKYELLYWEGEDGTQQKVEFDPTSAYAVEGLKPDTLYKFRLGARSELG
VGVYTPTIEARTAQSTPSAPPQEVECVSTSSTTIRVSWVPPPAQSRNGVITQYSIAYQAV
EGDDNTKHVVDGIGREHSSWEIKDLEKWTEYKVWVRAHTDVGPGPESIPVHVRTDEDVPS
APPRKVEVESVNSTAIRVSWKLPISNKQHGQIRGYQVTYVKLENNEPRGQPVIKDVMLSE
AQWRAEDSVDHETVIGGLLPETTYSVTVAAYTTKGDGARSKPKVITTTGAVPGRPTMMIS
TTAMNTALIQWHPPKEMVGELLGYRLQYRRLDEEKMNTIDFGKRDHHYTVTNLHKGATYL
FKLSAKNRAGPGEEFEKEITTAEDVPSGFPQNLRVVGLTTSTTEVAWEPPVLAERNGKIV
NYTVVYRDINSQQDLVNITKDTSITLTNLKPDTTYDIKVRARTNKGVGPLSPSIQSRTMP
VEQVFAKNFRVNAVMKTSVLLSWEVPDSYKSAVPFKILYNSQSVEVDGHSMKKLISDLQP
DTDYSFVLMNRGSSAGGLQHLVSIRTAPDVLQSKPIATDKYIQEGKFTLTLPKVQTSVPV
RWYYIVVVPADQSTSSPTARWRTPDEMELDQLLEAISRGSQSRRQRRQADRLKPYIAAQV
DVLPETFTLGDEKNYKGFYNKPLSQDLSYRCFVLASLEDGDTKRYAASPYSDEIVMEVAS
AKQQDEPEMLWVMGPVLAVILIIIIVIAILLFKSKQERKRAHSPSSKDEHSIGLKDSLLA
HSSDPVEMRRLNYQTPGMRDHPPIPVTDLADNIDRLKANDGLKFSQEYESIDPGQQFTWE
NSNLEVNKPKNRYANVIAYDHSRVILTSID
NT seq
4411 nt
NT seq
+upstream
nt +downstream
nt
atgtgcacgtggagcaagaagcatcccgggccctcggcagtcgccctggcccggtccaca
cgcgctggagcagggcagagcctggcctctgcgctgggtcgaaagcagcgagggaagcat
gttgctcagttgactgccgtgttcaggtggcaggtgccagctgaggactgctgcgggaga
ggcgccgtcttccagcactcccccctgcccggagccgctgccctccctaccctgcttggg
gaagaggaaaaaagcggcttcctgccaggcaagccaacgtttatgaaagctcctgaagat
cagattgggatttctggaggagtggcctcttttgtgtgtcaggcaacaggagagcctaaa
cctcgtatcacatggatgaagaaggggaagaaagtcagttctcagcggtttgaggttatt
gagtttgatgatggatcaggatcagttctgcggatacagcccctacgtgttcatcgagat
gaagctatctatgagtgcacagcaaccaacagtgttggggagataaacacaagtgccaaa
ttaacagtgttagaagaagaccacctcccagctggcttcccgaccattgacatgggccca
cagctgaaggtggtggaaaaggcccgcacagccacaatgctctgtgctgccagtggtaac
cctgatcctgaaatctcctggttcaaggacttcctgcctgtcgacactgcaactagcaat
gggcgaatcaagcagctccgctcggtatctctgggtggtacaccgatcagaggagctctg
caaatagagaacagtgaggagtcagaccaaggcaaatacgaatgtgttgcaaccaacagc
gcaggaacccgctactctgctccagctaacctttacgttcgagatcagcgagaagtgcgg
cgtgttgctcctcgattctctatccctccgagcaaccacgaggtgatgcctggggggagc
gtgaaccttacgtgcgtggcagtaggtgctccgatgccctacgtgaagtggatggctggt
gtggaggaactgaccaaagaggatgagatgcctgttggtaggaatgtcctggagctgaat
aacattgtgcagtctgccaactacacctgtgtggccatatcctccctcggcatgatcgaa
gccacagcccagatcactgttaaagcactgccaaagcctccaacagaaccattagtgact
gaaacgacagctaccagcgtgaccctcacctgggattcgggcaactctgaccccatttca
tattacgtcatccagtacaagcccaaatctttggagggtcagttccaggaggtggatggt
gtggcaacaacccgctatagcataggtgggctcagccctttctcggagtatgagttccgg
gtcatcgcagtcaataacattggcaggggtccccccagtgagctggtcgaggcccgaaca
ggagagcaagctccttcaagcccacccctaaaagtccaggcacggatgctgagcgccagc
accatgctggtccagtgggagcagccagaggagccaaatggacagatccgagggtaccgt
gtttactacaccactgacccacatctgcctttgagcatgtggcagaaacacaacactgat
gacagccacctcaccaccgtggggagcctcatcacaggaaccacgtacagcatccgcgtc
ctggcctttacttcagtgggcgatggacccccgtcagacatcatccaggtcaaaacgcag
caaggggttcctgcccagccagccgacttccaggctgaagcagagtctgatacccgcatc
cttttgacatggctgcctgcctctcaggaacgcattaccaaatacgagctgctgtattgg
gaaggggaagatggcactcagcaaaaggtggagtttgacccaacctctgcatatgctgtg
gaaggtctcaaaccagacacgctgtataagtttcgccttggtgcccgctcagagctgggg
gtaggagtctacactcccacgattgaagccagaactgcccaatccaccccctccgcccca
ccccaagaagtcgagtgtgtaagcaccagctccactaccatccgggtaagttgggtgcca
ccgcctgcccagagccgcaatggggtcatcacccagtactccattgcataccaggcagtg
gaaggagatgacaacaccaagcatgtggtggatggcattggacgggagcactccagctgg
gagatcaaggacctggagaaatggaccgagtacaaggtgtgggtaagggctcacactgat
gtggggccaggaccggagagcatccccgtgcacgtgcgcactgatgaggatgtgcccagt
gccccaccacgaaaggtggaggtagagtctgtgaattcgactgccatccgggtgagctgg
aagctgcccatctccaacaagcagcatgggcagatccgcgggtaccaggttacctacgtg
aagctggaaaacaacgagccccgagggcagccggtgatcaaggacgtcatgctgtcagaa
gcacagtggagagctgaggactccgtcgatcatgagacggtcattggaggcctgctgccg
gaaacgacctactctgtcacagtcgctgcctacaccaccaaaggagacggtgcccgcagc
aagccgaaagtcatcaccaccacaggggcagtcccggggaggcccaccatgatgattagc
acgacagccatgaacacagccctcatccagtggcacccacccaaggagatggtaggggag
ctgctgggttaccggttgcagtacagacgtcttgatgaggaaaagatgaacacaatagac
tttggaaagagagaccatcactacactgtgaccaacctgcacaagggggccacatacctc
ttcaaactgtctgccaagaacagagctggcccaggagaggagtttgagaaggagatcact
actgccgaagacgtgccaagcggctttccacagaacctacgtgtggttggtctcaccact
tccaccacagaagttgcatgggaacccccagtcttggcagaaagaaatggcaagattgtc
aactacacggtggtatacagggacataaatagccagcaggacctggttaacatcaccaag
gacacgagtatcactttgacgaatttgaagcctgatactacttacgacatcaaagtgagg
gcccgcaccaataagggggttgggccactcagccccagcatccagtcccggacgatgcct
gttgagcaagtgtttgctaagaacttccgtgtcaatgccgtcatgaaaacgtcggtgttg
ttgagctgggaagtgcctgactcctacaaatctgcagtgccttttaagattctgtacaac
agccagagtgtggaggtggacggccactcaatgaagaaactcataagtgacctccagcca
gacacggattattcttttgtgctaatgaaccgtgggagcagtgctggggggctccagcac
cttgtctcaatccgcaccgctcctgatgtcttgcaaagcaaacccatcgccacagacaag
tacatacaggaaggaaaattcactctcacccttcccaaagtgcagacctctgtgcctgtt
aggtggtactacatcgtggttgtgccagcagatcagagcaccagcagcccaactgctcgg
tggcggacacctgatgagatggagctggaccagctgctggaggccataagtcgagggagt
cagagcaggcgccagcgacgccaagcagacagactcaagccctacattgctgctcaagtg
gatgtgctgcctgagaccttcaccctgggggatgagaagaactacaaaggtttctacaac
aagcctctgtctcaagacctgagctatcgctgctttgtgctggcctctctggaggatggg
gacacgaagagatacgcagccagcccctactcagatgagatcgtgatggaagtggcttca
gcaaagcaacaggatgaaccagagatgctgtgggtgatgggacccgtcctggccgtgata
ctgatcatcatcattgtcattgctatactcctcttcaaaagtaagcaagaaaggaaaagg
gcacactccccctcttccaaggatgagcactctatcggcctgaaggactcgctgttggcc
cactcctctgacccggttgagatgaggcggctcaactaccagacgccaggcatgcgcgac
caccctcccatccctgtgacggaccttgctgacaacattgataggctgaaggccaacgat
gggctgaagttctcccaggagtatgagtccattgatccggggcagcagtttacctgggag
aactccaacctggaagtgaataaaccgaaaaaccgctatgcaaacgtaatcgcctatgac
cactcacgtgtcatcctgacctccattgatg
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integrated database retrieval system
