Brucella sp. 09RB8471: BKD03_14825
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Entry
BKD03_14825 CDS
T06323
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
brj
Brucella sp. 09RB8471
Pathway
brj03030
DNA replication
brj03410
Base excision repair
brj03420
Nucleotide excision repair
brj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
brj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BKD03_14825
03410 Base excision repair
BKD03_14825
03420 Nucleotide excision repair
BKD03_14825
03430 Mismatch repair
BKD03_14825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brj03032
]
BKD03_14825
03400 DNA repair and recombination proteins [BR:
brj03400
]
BKD03_14825
Enzymes [BR:
brj01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BKD03_14825
DNA replication proteins [BR:
brj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BKD03_14825
DNA repair and recombination proteins [BR:
brj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BKD03_14825
NER (nucleotide excision repair)
GGR (global genome repair) factors
BKD03_14825
MMR (mismatch excision repair)
DNA ligase
BKD03_14825
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BKD03_14825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH
Motif
Other DBs
NCBI-ProteinID:
APX70449
LinkDB
All DBs
Position
2:1725322..1727481
Genome browser
AA seq
719 aa
AA seq
DB search
MSDISVEKLTELEAAAELERLARAIAHHDELYHAKDSPEISDAAYDALKRRNEAIEARFP
ALVRDDSPSRRVGAAPALATFAPVVHARPMLSLDNAFSDEDVRDFVGTVYRFLGQLPDDS
IAFTAEPKIDGLSMSIRYENGILVSGATRGDGTTGENVTANIRTIAEIPNRLPAGAPAVV
EVRGEVYMAKSDFLALNAQMEAEGKQTYVNPRNTAAGSLRQLDAKVTASRKLRFFAYAWG
EMSDMPADTQLGMVEVFRQWGFPVNPLMKRFNSVDGLLAHYRAIGMERPTLDYDIDGVVY
KVDRLDLQTRLGFRSRSPRWAIAHKFPAEQALTILRGIDIQVGRTGALTPVARLEPITVG
GVVVTNATLHNEDYIKGIGQKGEPIREGRDIRIGDSVIVQRAGDVIPQIVDVVLEEGKKR
GEPYQFPHVCPACGSHAVREEGEAVRRCTGGLICPAQAVERIRHFVSRNAFDIEGLGEKQ
VEFFFNAEDTALCIRSPADIFTLKKRQENSLTKLQNIEGFGATSVKKLYDAIDARREIAL
HRFLFGLGIRHVGEVNAKRLARAYLSYAAFEKAALEAVPPKEGDRTDKGSEAWQDMLAVE
GIGSIVAEAVVDFYGEPHNREVLAALLAEVTPLDEEARVATGSPVEGKTVVFTGSLERMS
RDEAKAMAERHGAKTAGSVSKKTDLVVAGPGAGSKLAKATELGIEVINEDDWFKLVGED
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatatttccgtcgagaaactgaccgaacttgaagctgccgccgaactggaacgg
ctggcgcgcgcgattgctcatcacgacgagctttatcacgccaaggacagtccggaaatt
tccgatgcggcttatgatgcgctgaagcggcgcaacgaggcgattgaagcgcgctttccg
gcacttgtccgcgatgacagcccgtcgcggcgtgtgggtgcagccccggcgcttgccacc
tttgcgcctgttgttcatgcgcggcccatgctgtcgctggataatgcctttagtgatgag
gacgtgcgcgattttgttggcaccgtctatcgctttctgggccaactgccggatgattcc
atcgcctttaccgctgaaccgaagatcgatgggctttccatgtcgatccgttacgagaat
ggaattctggttagcggtgcgacacgcggggatggcacaacgggcgagaatgtaacagcc
aatatccgtaccattgctgaaatcccgaacaggcttccggcaggtgcgcctgctgtcgtg
gaagtgcgcggtgaggtctatatggccaagagcgactttctggcgctcaatgcgcagatg
gaggcggagggcaagcagacctatgtgaacccgcgcaacacggccgcaggttcgctgcgc
cagcttgacgcgaaggtaacggcaagccgcaagctcaggttcttcgcctatgcctggggc
gaaatgtcggacatgcctgcggatacgcaattgggcatggtcgaggtttttcgccaatgg
ggctttccggtcaatccgctgatgaagcggttcaacagcgtggatgggctgcttgcgcat
tatcgcgccatcggcatggagcgtcccacgctcgattacgatatcgacggtgttgtttac
aaggtggaccggctcgacctgcaaacgcggcttggttttcgctcgcgcagcccgcgctgg
gcgattgcgcataaatttccggcggaacaggcgctcaccattttgcgcggcatcgatatt
caggtgggccgcactggcgcgctgacgccggttgcgcggctggagccgatcacggttggc
ggtgtggtcgtgaccaatgccacattgcacaatgaggactatatcaagggcatcggccag
aagggcgagccgatccgggaggggcgcgatatccgcattggcgatagcgtgatcgtgcag
cgcgcgggcgatgtcattccgcagatcgtggatgtggtgcttgaggaaggcaaaaaacgc
ggcgagccttatcagtttccccatgtctgcccggcctgcggcagccatgccgtgcgcgag
gagggcgaggcggtgcgccgctgcactggcgggctgatctgccctgcgcaggcggtggaa
cgcatccgccattttgtgtcgcgcaatgccttcgacattgaggggcttggcgaaaagcag
gtcgagttcttcttcaatgcggaagatacggccctttgcatccgctcgcctgccgatatt
ttcacactgaaaaagcggcaggaaaattcgctgaccaagcttcagaatatcgaaggcttc
ggcgcaacttcggtgaagaagctttatgacgccatcgatgcgcggcgcgagattgcactc
caccgctttctgtttggtcttggcatccgccatgtgggcgaggtgaatgccaagcgcctt
gcccgcgcctatctttcctatgccgcttttgagaaggcggcgctggaggctgtgccgcca
aaagaaggcgaccgcaccgacaagggcagcgaagcgtggcaggacatgctggccgtggag
gggatcggttccatcgtggcggaagctgtggtcgatttttatggcgagccgcataaccgc
gaagtgctggccgcacttcttgccgaagtaacgccgcttgatgaggaagcgcgtgtggcg
accggctcgcccgtcgagggcaagacggtggttttcaccggcagtctggagcgcatgtca
cgcgatgaagcgaaggccatggccgagcgtcatggcgcgaagacggcaggctctgtctcc
aagaagaccgatctcgtggtggcagggccgggggccggttccaagcttgccaaggcgacg
gaactgggcattgaggtcatcaatgaagacgactggttcaagcttgttggggaggattga
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