Bradyrhizobium sp. ORS 285: BRAD285_7425
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Entry
BRAD285_7425 CDS
T04956
Symbol
nth
Name
(GenBank) endonuclease III DNA-(apurinic or apyrimidinic site) lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bro
Bradyrhizobium sp. ORS 285
Pathway
bro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BRAD285_7425 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bro03400
]
BRAD285_7425 (nth)
Enzymes [BR:
bro01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BRAD285_7425 (nth)
DNA repair and recombination proteins [BR:
bro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BRAD285_7425 (nth)
Prokaryotic type
BRAD285_7425 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
SMX62020
UniProt:
A0A1Y6KVP5
LinkDB
All DBs
Position
complement(7441404..7442267)
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AA seq
287 aa
AA seq
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MAKITRPQRAKPAPVRTPAKKAAKAAPGAASKSISRTVKKAAKISPAAKPSSPKPSSPKA
KAGSVKPVKTALKATKPWTPAEIREAFSRFAQANPEPKGELEHVNPYTLLVAVVLSAQAT
DAGVNKATRPLFAVADTPQKMLALGEDTVRDYIKTVGLFRTKAKNVIALSEMLIAEFGGE
VPRTRAELESLPGAGRKTANVVLNMAFGEHTMAVDTHVFRVGNRTGLAPGKTPLEVELGL
EKVIPAEFMLHAHHWLILHGRYTCLARKPRCELCLIKDLCRWPEKTA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaatcacccgcccccaacgcgccaagccggccccggttcgcacgcccgccaaa
aaggcggccaaggctgcgccgggagcagcgtccaaatccatctccagaacggtcaagaag
gctgccaagatcagcccggcggccaagccttcttcgcccaagccttcttcgcccaaggcg
aaggcaggctcggtcaagccggtcaagacagcgttgaaggcaaccaaaccctggacgccg
gcggagatccgcgaggcgttcagccggttcgcgcaggccaatccagagccgaagggcgaa
ctcgagcacgtcaacccctacaccttgctggtcgccgtggtgctgtcggcgcaggcaacc
gacgccggggtcaacaaggcgacgcggccgctgttcgcggttgccgacacgccgcagaag
atgctcgcgctcggcgaggacaccgtgcgcgactacatcaagaccgtcggcctgttccgc
accaaggccaagaacgtgatcgcgctgtccgagatgctgatcgccgagttcggcggcgag
gtgccgcgcacccgcgcggagctggagtcgctgccgggcgcggggcgcaagaccgcgaat
gtcgtgctcaacatggcgttcggcgagcacacgatggcggtcgatacccacgtgttccgc
gtcggcaaccgcacgggactggcgccaggcaagacgccgctggaggtcgagctcgggctg
gagaaggtgatcccggccgagttcatgctgcacgcccatcactggctgatcctgcacggc
cgctacacctgcctcgcccgcaagccgcgctgcgagctgtgcctcatcaaggacctctgc
cgctggccggagaagacggcctga
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