Brooklawnia propionicigenes: brsh051_24140
Help
Entry
brsh051_24140 CDS
T09125
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
broo
Brooklawnia propionicigenes
Pathway
broo03030
DNA replication
broo03410
Base excision repair
broo03420
Nucleotide excision repair
broo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
broo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
brsh051_24140 (ligA)
03410 Base excision repair
brsh051_24140 (ligA)
03420 Nucleotide excision repair
brsh051_24140 (ligA)
03430 Mismatch repair
brsh051_24140 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
broo03032
]
brsh051_24140 (ligA)
03400 DNA repair and recombination proteins [BR:
broo03400
]
brsh051_24140 (ligA)
Enzymes [BR:
broo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
brsh051_24140 (ligA)
DNA replication proteins [BR:
broo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
brsh051_24140 (ligA)
DNA repair and recombination proteins [BR:
broo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
brsh051_24140 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
brsh051_24140 (ligA)
MMR (mismatch excision repair)
DNA ligase
brsh051_24140 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
brsh051_24140 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
HHH
BRCT_2
PGRL1_N
HHH_3
Motif
Other DBs
NCBI-ProteinID:
BEH03133
UniProt:
A0AAN0MHU9
LinkDB
All DBs
Position
2641810..2644011
Genome browser
AA seq
733 aa
AA seq
DB search
MPSDDDDDQITGADLHLNATPEVAEPGLGEQHRWSELAGRINDAQEAYYGLDAPTMSDAE
YDSLMRELQDLEKRFPQLRTPDSPTQRVGAAQRVTDFAPVTHLERLLSLDDIFSTQELTD
WIARTQRSLGEQKASWLCELKIDGLAVDLVYRGGRLVSGATRGDGRVGENVTPNVLTIAG
IPHQFAGPDIPEVLEVRGEIFFPIEAFADLNASLVEAGKAPFANPRNAAAGSLRQKNPAV
TATRPLQLLVHGIGAHEGMNIERQSQAYELLAGWGFPTSPAYRVVSSVSDVLHYVSYYGE
HRHDLKHEIDGVVVKVDDLAQQAQLGSTSRAPRWAIAYKYPPEQVNTKLLDIQVNVGRTG
RVTPFAVMEPVKVAGSTVSRATLHNAWEVTRKGVLIGDTVVLRKAGDVIPEILGPVVELR
DGTERPFVMPTHCPVCGAELRPEKESDKDIRCPNAKSCPAQLTERLFALASRHSLDIEAL
GWEGARGLLASGVLTNEAGLFDLTAAQLMRVPLYTRAAKKSDPPDQIVDGRVLSATGHKL
LSNLQSAKQQPLWRVLVGLSIRHVGPTAARALADHFGSMDAIRSASVDELATTEGVGPII
AEAVVEWFTEPWHLEVVDRWAAAGVRMADEPAAPQQTEPQTLNGLTVVVTGTLKGFTRDS
ARDAILAHGGKAATSVSRKTDYVVVGENAGSKAAKAEELGLPILDEDGFVRLLDSGPQAE
GEPAERTGRKADK
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgccttcggatgacgacgacgaccagatcaccggtgccgacctgcacttgaacgcaacc
cccgaggtcgctgagccggggctgggcgagcagcaccgctggagcgagttggcgggacgc
atcaacgacgcccaagaggcctattacggcttggacgcgcccacgatgtcggacgccgaa
tacgactcgctgatgcgcgaactgcaggatctggagaagcgttttccgcaactgcgcact
cccgacagccccacgcagcgggtcggcgcagcacaacgcgtcaccgatttcgcgccggtc
acccatctggagcggctgctcagcctcgacgacatcttcagcacccaggaactcaccgat
tggatcgcccgtacccagcggtcactcggcgagcagaaagcgtcatggttgtgcgaactg
aagatcgacggactggccgttgacctggtctatcgcggtggccggctggtatccggtgcg
acccgcggcgacggcagggtaggcgagaacgtcacccccaacgtgttgacgatcgcagga
atcccgcatcagttcgctggacccgacatccccgaggtgctcgaggtccgcggtgagatc
ttctttcccatcgaggcattcgcagatctgaatgcatcgttggttgaggcaggaaaggcc
cctttcgcaaacccacgcaatgcggcggccggttcgctgcggcagaagaaccctgcggtg
acggccacccgcccacttcagctgctggtgcacggcatcggggcccacgagggcatgaac
atagagcgccagtcgcaggcctacgagttgctcgccggctggggattcccgacctcaccg
gcataccgggtggtctcgtcggtgtccgacgtgctgcactacgtgagctactacggagaa
caccggcacgatctcaaacatgagatcgatggtgtggtggtcaaggtcgatgacctcgcc
cagcaagcacaactcggctcgacgtcacgggcgccgcgctgggcgatcgcctacaagtac
ccgcccgaacaggtgaacaccaagctgctcgatatccaggtcaatgtcggacgcaccggc
cgcgtgaccccctttgcggtgatggagccggtcaaggtcgccggttccacggtctcgcgg
gccaccttgcacaatgcctgggaagtgacccgcaagggcgtgctgatcggtgacaccgtc
gtgctgcgcaaggccggtgacgtgatcccggagatcctcgggccggtcgtggaactgcgc
gatggcaccgagcgacccttcgtgatgcccacccactgcccggtctgcggggcggagctt
cgtccggaaaaggaatccgacaaggacatccgctgcccgaacgcgaagtcctgccccgct
cagctgaccgaacggctgttcgcgctggcatcgcggcacagcctcgacatcgaggccctg
ggctgggagggggcccgcgggttgctggccagcggggtgctgacgaacgaggcgggcctt
ttcgacctgaccgccgcacagctgatgcgggtgcccttgtacaccagggcggccaagaag
tcggacccgcccgatcagatcgtcgatggacgcgtgctgtcggcgaccggccacaagttg
ctgtcgaatctgcagtccgccaagcagcagccgctgtggcgagtgctggtgggcctgtcg
atccgccacgtcgggccgaccgcggcacgggcgctggccgatcacttcggctcgatggac
gcgatcaggtctgcgtcggtggacgagttggcgaccaccgagggcgtgggcccgatcatc
gctgaggcggttgtggagtggttcaccgagccctggcatctcgaggtggtggatcgctgg
gcggccgccggggtgcggatggccgacgagccggccgcacctcaacagactgagccgcag
accctgaacgggctgacggttgttgtcacgggcacattgaaaggcttcacccgggactct
gcgagggacgcaatccttgcccacggcgggaaggccgcgacctcggtgtcacgcaagacc
gactatgtggtggtgggggagaacgcagggtcgaaggccgccaaggcggaggaactgggg
ttgccgatcttggacgaggacggtttcgtccggttgctggattcggggccgcaggccgag
ggcgagccggccgagagaactgggcgcaaagccgacaagtag
DBGET
integrated database retrieval system
