Bacillus rossius redtenbacheri: 134542843
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Entry
134542843 CDS
T09888
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
134542843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bror03400
]
134542843
Enzymes [BR:
bror01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
134542843
DNA repair and recombination proteins [BR:
bror03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
134542843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
BRCT
RNA_ligase
mRNA_cap_enzyme
DNA_ligase_IV
LIG3_BRCT
Glyco_hydro_99
Motif
Other DBs
NCBI-GeneID:
134542843
NCBI-ProteinID:
XP_063243477
LinkDB
All DBs
Position
9
Genome browser
AA seq
908 aa
AA seq
DB search
MQLTVASKIPFSDFCNLCQKISLCPKPKKADCLQRFIGYFRNYAKTLKDSGADVDDSFYP
VLRLLLPQLERERAAYGVKEHVLAKMFIRILCLPKQGPEAHKLLHFKAPHAASTQSADFA
DVAYLVLRSRCRQGTDHLTVEQVNTSLDKVAARHAAHDPRGMEDELRAVLVVMSAASQKW
LVRVLLKDMRLGLGSKRVLTAFHPDAQDLYDVTNDLRKCCETLKDPARRLHEAEVQVFSP
CRPMLAERCDVRRVEEAMRKGRVYFVETKHDGERFQLHMRDGLYKYFSRNGFDCTDTFGS
CALVGQLTPHVARLLRPGVRSVILDGEMMGWDTRLKCYKTKGISFDVKSLRAGGALQPCY
CVFDVLLLDGQVLTNRPLSERLAALRGLFAQEEGVLMHTERAEVATGARVAEELNTAIDR
RLEGIILKDPASVYKPNARNAGWFKIKPEYTDGLMDHLDVIIMGGYYGDGKHRGIVSHFL
VGLAVPSPVKGEDPREFWSLGRVGSGYTSDELADLLLKMSPHWRPVELGRCPPGLVWTRE
RPEVWIPPEKSVLLEVKATEIVRSNLFKVEYTLRFPRVEKIRYDKNWSECLTTAEFEDLR
QKASGLLYSRHVDTDERAAASPRKKQQAREKPCLAESFRSCDLSGVSRRSGVLAGRQFCV
MTGWRDLSKVQVEARIAEHGGSVTQNPGPDTHCVLADGTPLRVRNVLRSGRHDVARLGWL
MGVLGGGAPELQGWEPADLLGARPATARALAARYDKYGDSYTRPAGRRSLVFPMGQVDKL
GDAVEPSPADMAEFDIELFSDPSPWGTFRLCRAYFDKFASVNDPSSPEVCNMFSTEIDFM
FYGGEVVSVVDERTTHVIFQPGEETRLAELRRLSAERAARLHLVCASWVEESVRSGRRLP
ERDHYPVA
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgacagttgcatcgaagattcctttcagtgacttctgcaacttgtgccagaag
atcagcttgtgcccgaagccgaagaaggcagattgcctgcaacgcttcatcgggtacttc
cgcaactatgccaagaccctcaaggactctggtgctgacgttgacgacagcttctacccg
gtactgcggctgctgctgccgcagctggagcgcgagcgcgcggcgtacggcgtgaaggag
cacgtcctcgccaagatgttcatccgcatcctctgcctgccgaagcaggggccggaagcc
cacaagctgctccacttcaaggcgccgcatgccgcgagcacgcagtccgcagacttcgcg
gacgtggcctacctggtgctgaggagccgctgtcggcagggcacggaccacctgaccgtg
gagcaggtgaacacgagcctggacaaggtcgcggccaggcacgccgcccacgacccgcgc
ggcatggaggacgagctgagggcggtgctcgtggtgatgtcggcggccagccagaagtgg
ctcgtcagggtgctcctcaaggacatgcggctggggctgggcagcaagcgcgtcctcacc
gccttccacccggacgcacaggacctgtacgacgtcaccaacgacctgcgcaagtgctgc
gagactctgaaggacccggcacgccgcctgcacgaggcggaggtgcaggtgttcagcccg
tgccggccgatgctggcggagcgctgcgacgtgcgccgtgtcgaggaggccatgaggaag
ggccgtgtctacttcgtggagacgaagcacgacggggagcgcttccagctgcacatgcgc
gacggcctctacaagtacttctccaggaacggcttcgactgcacggacacgttcggcagc
tgcgcgctggtgggccagctcacgccccacgtggcacgccttctccggccgggcgtgcgc
agcgtcatcctggacggagagatgatgggctgggacacccgcctcaagtgctacaagacc
aaagggatcagcttcgacgtgaagtccctgcgagcgggcggggccctgcagccgtgctac
tgcgtgttcgacgtgctgctgctggacgggcaggtgctgacgaaccggccgttgagcgag
cggctggcggcgctgcgcgggctgttcgcgcaggaggagggcgtgctgatgcacacggag
cgcgcggaggtggcgacgggagcgcgcgtcgcggaggagctgaacacggccatcgaccgc
cgcctcgaaggcatcatcctcaaggacccggccagcgtgtacaagcccaacgcccgcaac
gccggctggttcaagatcaagccggagtacacggacggcttgatggaccacctggacgtg
atcatcatggggggctactacggtgacggcaagcacagagggatagtcagccacttcttg
gttggtctggccgtgccctcgcccgtcaagggggaggatcctcgagagttctggtcgctg
gggcgtgtcggctccggctacaccagcgacgagttggcggacctgctgctgaagatgtcg
ccccactggcggcccgtggagctgggccgctgtcccccgggccttgtctggacccgggaa
cggccggaggtgtggatcccgccggagaagtccgtcctgctggaggtgaaggcaaccgaa
attgttagaagcaatttattcaaagttgaatacacattgcggtttccaagagttgagaaa
attcgttatgacaagaattggagcgaatgtcttaccaccgcagagtttgaagatctgagg
cagaaagcgtcgggcctgctgtactcgcggcacgtggacacggacgagcgggcggccgcg
tcgccgcgcaagaagcagcaggcgcgcgagaagccgtgcctggcggagagcttccgcagc
tgcgacctgtcgggggtgagccggcggtcgggcgtgctggccggccggcagttctgcgtg
atgacgggctggcgcgacctctccaaagtgcaggtggaggccaggatcgcggagcacggg
ggctccgtcactcagaaccctgggccggacacgcactgcgtgctggcggacggcacgccc
ctgcgagtgcgcaacgtgctgcgctcgggccgccacgacgtggcgcggctgggctggctg
atgggcgtgctgggcggcggggctcccgagctgcagggctgggagccggccgacctgctg
ggcgcgcgtcccgccacagcgcgcgccctggccgcgcgctacgacaagtacggggacagc
tacacgcgcccggccggccgccggtcgctcgtcttccccatgggccaggtcgacaagctg
ggagacgctgtcgagccatcgcctgctgacatggcggagttcgacatagagctgttctcc
gacccgagtccctgggggacgttccgcttgtgccgggcctacttcgataagtttgcctcg
gtgaacgacccatcatcgccagaagtttgcaacatgtttagtacagagatagatttcatg
ttctacggaggggaggtagtgtcggtcgtagacgagcgaacgacgcacgtcatcttccag
ccaggggaggagacgcgattggccgagctgcgacggctcagcgcggagcgggcagccaga
ctgcacctggtgtgtgcgtcatgggtggaggagagcgtgcgttccggccgccggctgccg
gagagggaccactaccctgtggcgtga
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