Brassica rapa (field mustard): 103833679
Help
Entry
103833679 CDS
T03449
Name
(RefSeq) xanthine dehydrogenase 1 isoform X1
KO
K00106
xanthine dehydrogenase/oxidase [EC:
1.17.1.4
1.17.3.2
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00230
Purine metabolism
brp00232
Caffeine metabolism
brp01100
Metabolic pathways
brp01110
Biosynthesis of secondary metabolites
brp01232
Nucleotide metabolism
brp04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
103833679
09110 Biosynthesis of other secondary metabolites
00232 Caffeine metabolism
103833679
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
103833679
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brp04147
]
103833679
Enzymes [BR:
brp01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
103833679
1.17.3 With oxygen as acceptor
1.17.3.2 xanthine oxidase
103833679
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of breast milk
103833679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
FAD_binding_5
Fer2_2
Ald_Xan_dh_C
CO_deh_flav_C
Fer2
Motif
Other DBs
NCBI-GeneID:
103833679
NCBI-ProteinID:
XP_009108028
UniProt:
M4D513
LinkDB
All DBs
Position
A01:1711461..1718128
Genome browser
AA seq
1357 aa
AA seq
DB search
MGSLKNDGELTEAILYVNGVRRVLPDGLAHMTLLEYLRDIGLTGTKLGCGEGGCGACTVM
VSNYDIKSKTCVHYAVNACLAPLYSVEGMHVISIEGIGHRKLGLHPLQESLASAHGSQCG
FCTPGFIMSMYALLRSSKNSPCEEEIEECLAGNLCRCTGYRPIVDAFRVFAKSDDALYSG
VSSLRLEDGSTICPSTGKPCSCGSKATNGEGNCNEDRIQSISYSDIDGAKYTEKELIFPP
ELLLRKLSPLKLRGNGGLTWFRPVSLQNLLELKANYPDAKLLVGNTEVGIEMRLKRLQYQ
VLISVAQVPELNALNVDDNGVELGSALRLSELLRLFRRVVKERPEHETSACKAFIEQLKW
FAGTQIRNVACIGGNICTASPISDLNPLWMASRAEFRIVNCSGEVRSIPAKDFFLGYRKV
DMGSNEILLSVFLPWTRPLEYVKEFKQAHRRDDDIAIVNGGMRVFLEEKGQELFVSDASI
AYGGVAPLSLRARKTEEFLIGKKWNKGLLEDALEVIQSDVLIKDDAPGGMVEFRKSLTLS
FFFKFFLWVSHDVHSVYPTVETFPPSHVSALQPVPRLSRSGKQDYETVKQGTSVGSPEVH
LSARMQVTGEAEYTDDTPVPPNTLHAALVLSKMPHARILSIDDSAAKSSLGFVGLFLAKD
IPGDNMIGPIVADEELFATDVVTCVGQVIGVVVADTHENAKTAAGKVEVMYEELPAILSI
KEAINAKSFHPNTEKRLRKGDVELCFQSGECDRIIEGEVQIGGQEHFYLEPHGSLVWTLD
GGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVP
SYLLNRPVKLILDRDVDMMITGHRHSFLGKYKVGFTNEGKILALDLEIYNNGGNSLDLSL
AILERAMFHSDNVYEIPHVRIIGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRIAAELD
KTPEEIKEMNFQEEGSITHYSQSLQHCTLQQLWKELKESSNFLKARREADEFNSQNRWKK
RGVAIVPTKFGISFTTKFMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFN
IPLSSVFVSETSTDKVPNASPTAASASSDMYGAAVLDACEQIIARIEPVASKHNFNTFAE
LVSACYFQRIDLSAHGFHIVPEIGFDWISGKGNAFRYYTYGAAFAEVEIDTLTGDFHTRA
ADIMLDLGYSLNPAIDVGQIEGAFVQGLGWVALEELKWGDAAHKWIRPGTLLTCGPGNYK
IPSINDVPFNLNVSLLKGNPNLKAIHSSKAVGEPPFFLASSVFFAIKEAIKAARTEVGLT
KWFPLETPATPERIRMACFDEFSAPFVSSDFSPKLSV
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgttgaagaacgacggagagctcacggaggcgatactctacgttaacggcgtt
cgtagagtgttgccagatggtttggctcatatgacgcttcttgaatacctcagagatatt
ggactgaccgggacaaagctgggatgcggcgaaggtggttgtggggcttgcacggtgatg
gtctctaactatgacattaaatccaagacatgcgtgcattatgctgtcaacgcttgctta
gcacctttgtattctgtagaagggatgcatgttatatccattgagggaattggccatcgc
aaactcggcttgcacccacttcaggaatcgttggcatctgctcatggttcccaatgtggg
ttttgcactcccgggttcatcatgtctatgtacgcgttactgaggtcaagcaagaactca
ccttgtgaagaggagattgaagagtgccttgcggggaatctatgtcgctgtactggttat
agacccatcgttgatgcgtttcgggtttttgcaaaatctgatgatgctctttatagtgga
gtttcctcacttagacttgaagatggttcaactatctgtccatctactggaaaaccttgt
tcatgtggatcaaaagcaacgaatggagaaggtaattgtaatgaagataggatacagtcc
atatcttacagtgatatagatggggctaagtacacagaaaaggagcttattttccctcct
gagcttttgctgaggaaattatctcctttgaagttaaggggaaatgggggactcacttgg
tttagacctgtaagccttcagaacttgcttgagctcaaagcaaactatcctgacgctaag
ctgctagtagggaacacggaggtgggaattgaaatgagactgaagaggttgcagtatcag
gtactaatctctgttgctcaagtcccagagctcaatgcattgaatgttgatgacaatgga
gtagagcttggttctgctttgagactttctgaactattgaggttattcaggagggttgta
aaggagcgtcctgaacatgaaacatcagcatgcaaggcttttattgaacagctgaagtgg
tttgctgggacacagataagaaatgttgcgtgcattggtggaaacatttgtacagctagt
ccaatatctgatttaaatcctctttggatggcgtcaagagcagagtttcggatagtcaac
tgcagtggggaagttaggtccatacctgcaaaagatttcttccttggttatcgtaaggtg
gatatgggaagcaacgagatcttgctgtcggtcttccttccatggacaaggcccttagag
tatgtgaaagagtttaagcaggctcatcgcagggatgatgatatagctattgtcaatggt
ggaatgcgtgtgtttcttgaagagaaaggtcaagaactgtttgtttctgatgcatcaatt
gcttatggtggtgtggctcctctttcgttgcgtgccagaaagactgaggaatttttgatt
ggaaagaaatggaacaaaggccttctggaagatgcgcttgaggtcatacagagcgatgtg
ttgattaaggatgatgctcctggtggaatggtggagtttaggaaatctttgaccctgagc
ttcttctttaaatttttcttatgggtttctcatgatgtgcatagtgtataccccactgta
gagacctttccaccctcccatgtatcagctcttcaacctgttcctcggttatctagaagt
ggaaaacaagactatgagacagtaaaacaaggaacatctgttggctcgccggaggtccat
ctttcagccagaatgcaggtcacaggagaagcagaatatactgatgataccccagtgcct
cctaataccttgcatgctgctttagtgctaagcaaaatgccgcatgctcgcatcctttct
attgatgattcggctgccaaatcttcacttggttttgttggtctgtttcttgccaaagat
attcctggtgataatatgattggaccaattgttgctgacgaagaattatttgccacggac
gtggtcacatgcgttggacaagtcattggtgtggttgtggcggatacacatgagaatgca
aaaactgcagcagggaaagttgaagttatgtatgaggaactaccagcaatattatcaatc
aaggaggctattaatgctaaaagtttccatccgaacacagagaaaaggctaaggaaaggg
gatgtagagctgtgctttcaatccggtgagtgtgacaggattatagagggagaggttcaa
atcggtggtcaagaacacttttacttggaacctcatggtagtttggtttggacactggat
ggaggaaacgaagttcatatgatttcatccactcaagctcctcaaaagcatcagaaatat
gtttctcatgttctcggtcttccaatgtctaaagtggtatgcaaaaccaaacgaattgga
ggtggatttggtggtaaggaaacaagatcagctttcattgctgctgcagctgctgttcct
tcctacctattaaatcgtcctgtgaagctcatactggacagagacgtggacatgatgata
actggtcatcgtcatagtttccttggaaagtacaaggttgggtttacaaatgaaggaaaa
atattggcgttggatcttgaaatctacaacaacggtggaaactctttggatctttcccta
gctattctggaacgtgccatgtttcactcagataacgtttatgagattccgcatgtgagg
atcatagggaacgtttgctttactaattttcccagcaacactgctttccgagggtttgga
gggccccaaggtatgctcattactgaaaactggattcagagaattgcagcagagcttgat
aaaacccctgaagaaatcaaagagatgaactttcaagaggaaggatcaatcacacactac
tcacagtcccttcagcactgcacattgcagcagctctggaaagagctgaaagaatcctcc
aacttcttaaaggctcgtagagaagcagacgagttcaatagccaaaaccggtggaaaaag
cgtggtgtagctatagttcccacaaaatttggcatatcattcactacaaagttcatgaat
caggccggtgctcttgttcatgtttacaccgatgggactgttttggtgacacatggaggt
gtggagatgggtcaagggttgcatacaaaggtcgcccaagttgctgcatccgcctttaac
attcctcttagttcagttttcgtgtcagagacaagcaccgacaaggttccaaatgcgtca
ccaacggctgcttctgcgagctctgatatgtatggtgctgcagttttagacgcctgtgag
cagattatagcaagaattgagcctgttgcatcgaagcacaacttcaacacattcgctgag
ctggtaagtgcctgctactttcaacggatagacctatcagctcacggattccacatcgtt
ccggaaattggatttgactggatatctggaaaagggaatgcgtttagatactacacatac
ggagctgcctttgctgaagttgagatagacacgctgactggtgattttcacacaagagca
gctgatataatgctggacctcggatattctcttaaccctgccattgatgttggacaaata
gaaggagcttttgtacaaggactaggttgggtagctctagaagaactcaaatggggagat
gcagctcataaatggattcgaccgggaactttactcacttgcggaccaggaaactacaag
ataccttccattaacgacgttccgttcaacctgaatgtttctcttctcaaggggaatccg
aacttaaaggcgattcattcatctaaagcagtaggtgagccaccgttctttcttgcatca
tcagtcttctttgcgatcaaggaagccatcaaagctgctagaaccgaggtgggtctcacc
aagtggttccctctggagactccagccactccagagcgtatcagaatggcttgtttcgat
gagttttcagctccttttgtaagctcagacttctcccctaagcttagtgtttaa
DBGET
integrated database retrieval system
