Brassica rapa (field mustard): 103843349
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Entry
103843349 CDS
T03449
Name
(RefSeq) transcription factor PIF3
KO
K12126
phytochrome-interacting factor 3
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04075
Plant hormone signal transduction
brp04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
103843349
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
103843349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103843349
Transcription factors [BR:
brp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
103843349
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Zn_finger_prot
Motif
Other DBs
NCBI-GeneID:
103843349
NCBI-ProteinID:
XP_009118315
UniProt:
A0A679KHA5
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Position
A09:complement(43297749..43303147)
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AA seq
492 aa
AA seq
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MPLFELFRLSKAAQDNNTSPPVDEVVELVWENGQVSTQSRSKNTPPPHQGASSRPREVGN
SSKTTIMDEIPMSVPSLMTGLSQDDDFVPWINHHHPHQSLDGYCSEFLQEEEMALFQRRN
NSNESAPPPPAAASSSQHNGFQSHSLYGTDRAREPLVTSNKPGLINFSHFLRPATLGKSP
NNNADRSKEKSPQSPPKVFQTKVLGAKEVLNESVASAMPKDSQKACLVSEDSGRKEQESE
KAVVCSSVGSGNSLDGASESPSLSVKRKHSDVQDIDCHSEDVEGESGDGRKEAAPSRTGT
GSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQ
IMSMASGYYMPPVMFPPGMGHYPAAAAAMAMGMGMPYAMGLPDMSRAGPSVNHGPQFQVP
GMQQPVGMAIPRVSGGGFFTGSSSTMEMNKSDNGSTRDLSGGTKDETMTENNNGLRPIKR
KQTSSDQFCGSS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgtttgagcttttcaggctctccaaagctgctcaagacaataacacttctcca
cctgtagatgaagttgttgagcttgtttgggagaacggtcaggtttcaactcaaagcaga
tcaaagaacactcctccaccacatcaaggagcctcttctagacctagagaggtcggaaac
agctcaaagacaacaataatggacgagatccctatgtcggttccctctctaatgacgggt
ttgagtcaagacgatgactttgtcccatggatcaatcatcatcatcctcatcaatccttg
gatggatactgctctgagttcttacaagaggaggagatggcgttgtttcagagaagaaac
aatagcaatgaatcagctcctcctcctcctgctgctgcttcttcgtctcagcacaacggt
tttcaatcacattctctctatggaactgatagagctagagaaccgttagtcacaagcaac
aagcctggtttgatcaacttttcgcacttcttacgccctgcaactttggggaagagtcct
aataacaacgctgataggtctaaagagaagagtcctcaaagcccgcctaaagtgtttcag
accaaagtacttggagctaaagaggttctcaacgagtctgttgcctctgctatgcctaag
gatagccaaaaggcttgcctagtttcagaagactctggtagaaaggagcaggagagtgag
aaggctgttgtgtgttcttctgttgggtctggtaatagtcttgatggtgcgtctgaaagt
ccttcgctttctgttaaaagaaagcattctgatgttcaggatattgactgtcatagtgaa
gatgttgaaggagaatcaggagatggaagaaaagaagcagctccatcaagaacagggact
ggttcaaagagaagccggtcggctgaagtacataatctgtctgaaaggagacggcgtgat
aggattaacgagaagatgcgtgctcttcaagaactcataccaaactgcaacaaggtggac
aaagcttcaatgctagatgaagcaatcgaatatctcaagtcacttcaacttcaagtacag
atcatgtcaatggcttctggttactacatgccaccggtcatgttcccaccgggtatgggc
cattacccggctgctgctgctgcaatggcaatgggtatgggaatgccttatgcaatgggc
ttacctgatatgagccgtgccggtccctcggttaaccacggaccacagttccaggtcccg
gggatgcaacaaccagtggggatggcgattccacgtgtttctggtggtggtttcttcacg
ggttcttcttcaacgatggagatgaataagagtgacaatggttcgactagagacttatca
ggtggtacaaaagatgaaacgatgacagagaacaacaatggcttgagacctataaagaga
aaacagacgtcttctgatcagttttgtggatcgtcgtga
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