Brassica rapa (field mustard): 103845664
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Entry
103845664 CDS
T03449
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03420
Nucleotide excision repair
brp04120
Ubiquitin mediated proteolysis
brp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103845664
04120 Ubiquitin mediated proteolysis
103845664
09124 Replication and repair
03420 Nucleotide excision repair
103845664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103845664
03400 DNA repair and recombination proteins [BR:
brp03400
]
103845664
Enzymes [BR:
brp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
103845664
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
103845664
Multi subunit type E3
SCF complex
Ring finger protein
103845664
Cul2 complex
103845664
Cul3 complex
103845664
Cul4 complex
103845664
Cul7 complex
103845664
Cul8 complex
103845664
Cul9 complex
103845664
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
103845664
TCR (transcription coupled repair) factors
Cul4-CSA complex
103845664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
DUF8003
Motif
Other DBs
NCBI-GeneID:
103845664
NCBI-ProteinID:
XP_009120796
UniProt:
M4CDN1
LinkDB
All DBs
Position
A10:14634106..14635393
Genome browser
AA seq
118 aa
AA seq
DB search
MATLDSDVNMIPAGESSSSVGASSSSKKAKRFEVKKWSAVALWAWDIVVDNCAICRNHIM
DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atggctaccctcgatagcgacgtaaacatgatccctgctggagaatcctcgagctccgtt
ggggcttcttcgtcgagcaagaaggcgaagagattcgaagtgaagaagtggagcgccgtt
gctctttgggcttgggatatcgttgttgacaattgcgccatctgcagaaaccacatcatg
gatctctgcattgagtgtcaggctaatcaggccagcgctactagtgaggaatgcactgtt
gcttggggggtttgtaatcatgctttccactttcactgtatcagcagatggttgaagact
cgtcaagtttgtccattggataacagtgagtgggagttccagaagtatggtcactaa
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