KEGG   Brassica rapa (field mustard): 103845664
Entry
103845664         CDS       T03449                                 
Name
(RefSeq) RING-box protein 1a
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03420  Nucleotide excision repair
brp04120  Ubiquitin mediated proteolysis
brp04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103845664
   04120 Ubiquitin mediated proteolysis
    103845664
  09124 Replication and repair
   03420 Nucleotide excision repair
    103845664
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:brp04121]
    103845664
   03400 DNA repair and recombination proteins [BR:brp03400]
    103845664
Enzymes [BR:brp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     103845664
Ubiquitin system [BR:brp04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   103845664
  Multi subunit type E3
   SCF complex
    Ring finger protein
     103845664
   Cul2 complex
     103845664
   Cul3 complex
     103845664
   Cul4 complex
     103845664
   Cul7 complex
     103845664
   Cul8 complex
     103845664
   Cul9 complex
     103845664
DNA repair and recombination proteins [BR:brp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      103845664
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      103845664
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 103845664
NCBI-ProteinID: XP_009120796
UniProt: M4CDN1
LinkDB
Position
A10:14634106..14635393
AA seq 118 aa
MATLDSDVNMIPAGESSSSVGASSSSKKAKRFEVKKWSAVALWAWDIVVDNCAICRNHIM
DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 357 nt   +upstreamnt  +downstreamnt
atggctaccctcgatagcgacgtaaacatgatccctgctggagaatcctcgagctccgtt
ggggcttcttcgtcgagcaagaaggcgaagagattcgaagtgaagaagtggagcgccgtt
gctctttgggcttgggatatcgttgttgacaattgcgccatctgcagaaaccacatcatg
gatctctgcattgagtgtcaggctaatcaggccagcgctactagtgaggaatgcactgtt
gcttggggggtttgtaatcatgctttccactttcactgtatcagcagatggttgaagact
cgtcaagtttgtccattggataacagtgagtgggagttccagaagtatggtcactaa

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