Brassica rapa (field mustard): 103851357
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Entry
103851357 CDS
T03449
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03420
Nucleotide excision repair
brp04120
Ubiquitin mediated proteolysis
brp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103851357
04120 Ubiquitin mediated proteolysis
103851357
09124 Replication and repair
03420 Nucleotide excision repair
103851357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103851357
03400 DNA repair and recombination proteins [BR:
brp03400
]
103851357
Enzymes [BR:
brp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
103851357
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
103851357
Multi subunit type E3
SCF complex
Ring finger protein
103851357
Cul2 complex
103851357
Cul3 complex
103851357
Cul4 complex
103851357
Cul7 complex
103851357
Cul8 complex
103851357
Cul9 complex
103851357
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
103851357
TCR (transcription coupled repair) factors
Cul4-CSA complex
103851357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
103851357
NCBI-ProteinID:
XP_009126455
UniProt:
A0A398AEU6
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All DBs
Position
A02:complement(4218513..4219733)
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AA seq
119 aa
AA seq
DB search
MASLDSDVTMVPAGESSSSVAPSSSSTKKAKRFEVKKWSAVALWAWDIVVDNCAICRNHI
MDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atggcttccctcgattccgacgtcaccatggttcccgcaggagaatcctcaagcagcgtc
gccccatcgtcgtcgtccaccaagaaggcgaagagattcgaagttaagaagtggagcgcc
gtggctctctgggcttgggatatcgttgttgataattgcgccatctgcagaaaccacatc
atggatttgtgtattgaatgtcaggctaatcaggccagtgctacgagtgaggaatgcact
gttgcttggggggtttgcaaccacgccttccactttcactgcatcagcagatggcttaag
actcgtcaagtttgtccattggataacagtgagtgggagttccagaagtatggtcactaa
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