Brassica rapa (field mustard): 103854095
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Entry
103854095 CDS
T03449
Name
(RefSeq) putative transcription factor bHLH056
KO
K16189
phytochrome-interacting factor
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
103854095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103854095
Transcription factors [BR:
brp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
103854095
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
HLH
bHLH_IRO3
bHLH_SAC51
bHLH_LHW
S1CSD-TOTE-1
Motif
Other DBs
NCBI-GeneID:
103854095
NCBI-ProteinID:
XP_009129259
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All DBs
Position
A01:complement(4262752..4265190)
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AA seq
508 aa
AA seq
DB search
MGEDDIVELLWKSGHLVRSSQAQRPSPPPVLRGSGSGSGGGGGEESAPLPLPLPHSQPSD
ENILASWLNHHPPPGEDELNYHLFYSGLVSTPFTQPQGSVSLTPRPPPQPPPPPPPASFI
MFTPTAAERPMGQFIAGRRAESFFNFSRLRGNVHTGGRVEAAAAGAQWVKDSTQVGSSAT
PTSSAPESCLTPPTFTGGVAQTFAVPSLTRKVVETVCEIAGPSSSSTDTEQVQIQPATET
EAADERKRKEREEAVDDTEETGEEARGSTSRKRSRAAEMHNISERRRREKINEKLKALQE
LIPRCNKTDKASMLEDAIEYVKSLQLQIQMMSTGGMMPMMYAPNMQRFIAPSAMGMNRPP
FIPFPGMALPRQVHMVGLGPPYPPQRYPFTNVQGFDPSSVHLPAQQPDPNQPQFPGYMNP
YSQFVGLQQMQQPPHPTQLQNQSQVSFSQASSSKEPEDQDNKPIGKRGRGQRHFLRDELM
FTILADPFPSRCCRLKKKESAIQANAQS
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaagatgatatcgtggagctcttatggaagagcggccatcttgttcgaagcagc
caggcacagagaccctctcctcctcctgttctacgaggcagtggaagtggcagcggcggc
ggcggtggagaagaaagtgctccccttccgcttccgcttccccacagtcaaccgtctgat
gagaatattttggcgtcttggcttaaccatcatcctcctccaggcgaagatgagttaaac
tatcatcttttctactccggcctcgtctcaaccccatttactcagccccagggctccgtc
tctctcacacctcgtccaccaccacagccaccgccaccgccaccgccagctagttttatt
atgttcactccgacggcagcggagagaccgatgggtcagttcatcgccgggagaagggcg
gagagcttcttcaacttctcgaggctaagagggaacgtacatacaggcggtagagttgaa
gcagcagcagcaggtgcacagtgggttaaagattcaacgcaggtgggatcaagcgcgact
ccgacttcttctgcacccgagtcctgtctgacaccaccgacgttcactggcggagtggcg
cagacttttgcagtccccagtctcactcggaaggtggttgagacggtttgcgagatcgcc
ggaccgtcttcttcttcgacggatacagagcaggttcagatacaaccagcgacggagacg
gaagctgcggatgagaggaagagaaaagagagagaagaagccgttgacgataccgaggaa
actggcgaagaggctcgtggttcaacttctaggaagaggtcacgcgctgcggaaatgcat
aacatctccgaaaggagaaggagagaaaagatcaacgagaagctcaaggctctccaagaa
ctcattcctcgctgtaacaagactgataaagcttcaatgctagaagatgctatcgagtac
gtcaagtcgctacagctgcaaatacagatgatgtcgacgggaggtatgatgcctatgatg
tatgctccaaacatgcaacgtttcattgccccctcggcaatgggtatgaaccggcctcca
tttatacctttccctggcatggctttacctaggcaggttcatatggtaggtctaggtcca
ccgtatccaccacaaagatatccttttacaaacgttcaaggctttgacccatccagcgtc
catttaccagctcagcagcctgacccgaaccagcctcagtttccgggttacatgaatcct
tatagccagtttgttggtctccaacaaatgcaacaacctcctcatcctactcagttgcag
aatcagtctcaggtgagtttcagccaggcaagtagtagcaaggaacctgaagatcaggac
aacaaaccaataggtaagcggggaagggggcagagacatttcttgcgagatgagttaatg
ttcacgattttggcagatccatttccatcgcgttgttgcaggttaaaaaaaaaagaatca
gctatccaagcaaatgctcaaagttga
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