Brassica rapa (field mustard): 103861234
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Entry
103861234 CDS
T03449
Name
(RefSeq) sphingosine kinase 1 isoform X1
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00600
Sphingolipid metabolism
brp01100
Metabolic pathways
brp04148
Efferocytosis
Module
brp_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
103861234
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103861234
Enzymes [BR:
brp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
103861234
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Paralog
GFIT
Motif
Pfam:
DAGK_cat
YegS_C
CERK_C
Motif
Other DBs
NCBI-GeneID:
103861234
NCBI-ProteinID:
XP_009137195
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Position
A3
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AA seq
486 aa
AA seq
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MDPLQPDNDHLPSPPLISDRVLINGVVTPLTLTAEGELQWTTEPGRGKSTTEKEILSFAV
EGNKVRVKTLVERTGSSICCGGSGGDYARKDFVFEPLYDESRNLWCDKLRQHLHSLGRPK
RLLVFVNPFGGKKTARKIFLEEVKPLFDDADVQLDVQETKYQLHAKEMVRSMDVSRYDGI
VCVSGDGVLVEVVNGLLEREDWRTALKLPIGMVPAGSGNGMIKSLLDPVGMSCSAASATV
SIIRGHRRSLDVATIAQGTTKFFSVLMLAWGLVADIDIESEKFRWMGSARFDVYGLQRII
CLRQYNGRILFVPAPGFESCGQPASYHLDKESSVGDKTRGYQGPDTNLEDLEWREIKGPF
VSVWLHNVPWGAENTLAAPNAKFSDGFLDLIVMKDCPKLALLSLMTKLSDGTHVQSPYVS
YLKVKAFVLEPGARIDEEDKEGIIDSDGEVLARGRKSYKCDEKALMSYSKLQITVDQGLA
TLFSPE
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggatcctcttcagccggataacgaccacctcccgtctccgccgttaatctccgaccga
gttctaataaacggcgtcgtcacgcctttaactctaaccgccgagggagagcttcaatgg
acgacggaacccggccgcgggaaatcgacgacggagaaagagatcctgagcttcgcggtg
gaaggcaacaaggtcagagtgaagaccttggtggagagaacgggatcatcaatctgctgc
ggaggaagcggtggagattacgcgaggaaggacttcgtgttcgagcctctctacgatgaa
tctagaaacctctggtgcgataagcttcgtcaacaccttcactctctcggtcggcctaag
aggctgcttgtgtttgtgaacccttttggtgggaagaagacggctaggaagatatttttg
gaggaagtgaagccgttgtttgatgatgctgatgttcaacttgatgttcaagaaactaag
tatcagttgcatgcaaaggagatggttaggtccatggatgtatcgagatacgacggtatt
gtttgcgttagtggcgacggtgtccttgttgaggttgtgaatggactgctcgaaagagaa
gactggagaactgccttgaaactacctattggaatggtccctgcaggaagtggtaatggc
atgataaaatcattgctggacccggttgggatgtcttgtagtgcagcaagtgctactgtt
tccattatacgaggtcatagacgttctttagatgtggcaactatcgcacaagggactacc
aaattcttcagcgtcttgatgcttgcttggggattagtggctgatatagacatcgagtca
gaaaagttcagatggatgggcagtgctcgctttgatgtctatggtctccagaggataata
tgcttgagacagtacaatggacgaattctatttgtgccggctcctgggtttgaaagctgt
ggacaaccagccagttaccatctagacaaggagtcgtctgttggtgataagacacgagga
taccaaggacctgatactaatcttgaagatctggaatggagagaaatcaaaggccctttt
gtttcagtctggcttcacaatgttccctggggtgctgagaacactttggctgctcccaac
gctaagttttctgatggctttctggatttgattgtgatgaaagactgccccaagctcgcc
ttgttatcacttatgacaaagttgagtgatgggacacatgttcaatcaccttatgtatcg
tacctaaaggttaaggcattcgtgctggagccgggtgcacggatagacgaagaagacaag
gaaggaatcatagattcagacggagaggtattggcaaggggaagaaaatcatataaatgt
gatgaaaaggcactgatgtcttatagcaagcttcaaataacagttgatcaaggattagcc
actctcttctctcctgaatag
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