Brassica rapa (field mustard): 103861295
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Entry
103861295 CDS
T03449
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic-like
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103861295
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
brp01007
]
103861295
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brp03016
]
103861295
Enzymes [BR:
brp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
103861295
Amino acid related enzymes [BR:
brp01007
]
Aminoacyl-tRNA synthetase
Class I (U)
103861295
Transfer RNA biogenesis [BR:
brp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
103861295
Prokaryotic type
Other AARSs
103861295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
103861295
NCBI-ProteinID:
XP_009137246
UniProt:
M4DS96
LinkDB
All DBs
Position
A03:complement(25714909..25721380)
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AA seq
1097 aa
AA seq
DB search
MEEVVEGKEFSFPLEEEKVLSFWTQIDAFKTQLRRTEHLPEYIFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQTMTGHHVTRRFGWDCHGLPIENLIDKKFCIKLKSQVLEMGIDNYNEE
CRSVVDLYVEEWEKVITRSGRWIDFKKDYKTMDLSFMESVWWVFAQLFDKNLIYKGFKVM
PYSTGLKTPLSSSEAKGTYKNVSDPEAMVTFPVIGDQDNAAFVAWTTTPWTLPCNLALCV
NAEFVYLKVRNKHNGRVYVVAEPRLSALPSFANAAADTKKANKGGDSAAADSYEILEKFD
GASLVGKKYEPLFDYFSDFSSMAFRVVADDYVTDDSGTGIVHCAPAFGEDDYRVCLENNI
VEKGEGLVVAVDEDGLFTERITHFFGRYVKDADKDIIEAVKAKGRLVKTGSFTHEYPFCP
RSDTPLLNRALPSWFMRVDEQLKEQLLENTKETHWVPSHVKDKRFHNWLENARDWCISRS
RFWGTPLPIWISDDGEEVVVMDSVDKLEKLSGVKVFDLHRHHIDQITIPSSRGPEFGVLR
RVEDVFDCWFESGSMPFAYIHYPFENKELFEKNFPGDFVAEGLDQTRGWFYTLMVLSTAL
FGKPAFRNLICNGLVLAEDGKKMSKSEKNYPPPLEVIDEYGADAVRLYLINSPVVRAEPL
RFRKEGVLGVVKDVFLPWYNAYRFLVQNAKRLEIEGSGPFVPTDLATLRSSNVLDQWIHS
ATQSLVCFVRQEMDAYRLYTVVPYLLKFLDNLTNIYVRFNRKRLKGRTGEDDCHIALSTL
YNVLLTSCKVMTPFTPFFTETLYQNLRKACEGSEESIHYCSFPEADGTRVERRIEQSVTR
MMTVIDLARNIRERHKLPLKTPLKEITVVHPDADFLDDITGKLREYVLEELNVRSLVTCN
DTLKYASLKAEPDFSVLGKRLGKSMRLVAKEVKEMSQQDILSFEEAGKVTIAGHTLELTD
IKIVRVFKRPDGLKDTEIDANGDGDVLVLLDLRPDDSLYEAGVAREIVNRVQKLRKKSGL
EPTDVVEVYIESLDKDESVLQQVLSSQEQYIKDTIGSSLLPPTLMPSHAVILSDESFQNV
SKLSFKISLARPALKFN
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagtagtcgaagggaaggagttctcatttcctctcgaggaagagaaagtcctc
tccttctggactcagatcgatgccttcaaaacacagctcagacgaactgagcatctcccc
gaatacatcttctacgacggtcctcctttcgccaccggtctccctcactacggccacatc
ctcgccggcaccatcaaggacatcgtgactcgctaccagaccatgacgggccaccacgtc
acgcgtcgcttcgggtgggactgtcacggcctccccatcgagaatttgattgataagaag
ttttgtatcaagttgaaatcccaagtgcttgagatggggattgataactataacgaagag
tgtaggagcgtcgtggatctctacgtggaggagtgggagaaggtgatcactaggagtggt
cgttggattgatttcaagaaggactataagacgatggatctgtcgttcatggagagtgtt
tggtgggtttttgctcagctttttgataagaatcttatctacaaaggcttcaaggttatg
ccttatagtactggactaaagacgcccttgtctagctcagaagcgaaagggacctacaag
aacgtttcggatcctgaggctatggtgacgttcccagtcattggggatcaagataatgct
gctttcgtggcgtggactactactccgtggactcttccttgcaatctggctttgtgtgtc
aatgccgagtttgtttatctcaaggttcgtaacaagcataatgggagagtctacgtggtt
gctgaacctcgcctctcagctcttcccagctttgctaatgctgctgctgataccaagaaa
gccaacaaaggtggtgacagtgcggctgctgattcttatgagattttggagaagtttgat
ggagcttcccttgttgggaagaagtacgaacctttgtttgactactttagtgatttctca
agtatggcctttcgagtagtagcagatgattatgtcactgatgacagtggtactggcatc
gtccactgtgctcctgcctttggtgaagatgattaccgtgtttgtcttgagaacaacatc
gttgaaaagggtgagggactagttgtggctgttgatgaggatgggttgtttactgagagg
attacccatttttttggccgctatgtcaaagatgcagacaaggacatcattgaagccgtg
aaggccaaaggcagacttgttaaaactgggagctttactcacgaatatccattttgccct
cgatcagacactcctctcctaaatagagcccttcccagttggtttatgcgagtggatgag
cagctgaaggaacagctgttagaaaacaccaaagagacgcactgggttcctagtcatgtg
aaggacaaacgctttcacaattggcttgaaaacgcaagggattggtgtattagccgaagt
agattttggggcacgcctctacctatatggatcagtgatgatggtgaggaagttgttgtc
atggattctgtcgacaagcttgaaaagctctctggtgtcaaggtctttgatctacatcgt
caccatattgatcaaattacaatcccatctagtcgtgggcctgagtttggtgtgctccgt
cgtgtagaagacgtttttgattgttggtttgagagtgggtcaatgccttttgcgtacatc
cattatccttttgaaaacaaggagcttttcgagaagaacttccctggtgattttgtggct
gaagggcttgatcagactcgtggatggttttatactcttatggtgctatcgactgcacta
tttggaaagccagcatttcgaaatctgatttgcaatggtcttgtgcttgctgaggatgga
aaaaagatgagtaagagtgaaaagaattatccgcctcctctggaagtcatagatgagtat
ggagctgatgctgtgcgattgtacctcataaactctccggtcgtacgcgctgagccacta
cgcttcagaaaggaaggagtacttggtgttgtcaaagatgtatttcttccatggtacaat
gcatacagattccttgttcagaatgcaaagaggcttgagattgagggttctggaccgttt
gttcctactgatctagctactttacggtcatcaaacgttctcgatcagtggattcactca
gctacccagagtcttgtttgttttgtccgccaggagatggatgcttatcggctttatact
gttgttccttatcttttgaagttcctcgacaatctcactaacatatatgttagattcaac
cgcaagaggttaaaaggccgtacaggagaagatgattgtcacattgctctttcaactcta
tacaatgtgctcctcacttcttgcaaagtgatgaccccttttacacctttcttcactgag
acgttataccagaatctgcggaaagcatgtgaaggttctgaggaaagcattcattactgc
agttttccggaagcggatggaacgagagtggagaggaggattgagcaaagtgttacaagg
atgatgacagtcattgatcttgctcggaacattcgtgagcgtcacaagctgcccttgaaa
actccactaaaggaaatcactgtggttcatccagatgcagatttcttggatgacataact
ggaaaattaagagagtatgtcttggaagagcttaacgtaagatctcttgtgacatgcaat
gatactctaaagtatgcgtctctaaaagcagaaccagatttcagtgtattgggaaaacgg
cttgggaagtcaatgaggcttgttgcaaaagaagttaaagaaatgtctcagcaagatatc
ttaagtttcgaggaggccggaaaagttactattgctggacacacactggagctaacagat
atcaagattgtcagggttttcaaacgtccggatggtttgaaagatacggagattgatgca
aatggagatggtgatgttttggtgcttttggatttacgaccagatgattcgctgtatgaa
gcaggtgttgctcgtgagattgtcaatagggtccaaaaactacggaagaagtcaggtctg
gaaccaacagacgttgtggaagtgtacattgaatcattggacaaggatgaatctgttcta
caacaagttctgagctctcaggaacaatacattaaggatacaattggttcatctttgctt
ccgcctacgttgatgccatctcatgcagtgatattatctgacgagagtttccaaaacgtt
tcaaagctgtcgtttaagattagcttggctcgtccggctttgaagttcaactaa
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