Brassica rapa (field mustard): 103869246
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Entry
103869246 CDS
T03449
Name
(RefSeq) (E)-beta-ocimene synthase, chloroplastic
KO
K12742
isoprene synthase [EC:
4.2.3.27
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00900
Terpenoid backbone biosynthesis
brp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
103869246
Enzymes [BR:
brp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.27 isoprene synthase
103869246
SSDB
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Paralog
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Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
MPS2
DUF6847
Motif
Other DBs
NCBI-GeneID:
103869246
NCBI-ProteinID:
XP_009145565
UniProt:
A0A3P5Z6G9
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All DBs
Position
A1
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AA seq
587 aa
AA seq
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MATHDISFSSAFVCNALHQKSEHFLCNTVSKVTSAQAVTVRRRSANYCPSLWDHQYLLSL
ENIYAKEVESTEKAKLLKEEVRETLVKTQGSLEQLEMIDSLQRLGISYHYKHEIHDILKR
IYEQHHEIGRESPDLHATALGFFLLRQHSFDVSQDDFDIFKSENGIFRKTLPIKGVLSLY
EASYFSMDSEFKLKEARCFANERLTEFIAENSTTILGTNETYILDMVKRALVNPYHWSTR
RIEARWYIDVYRKKHDMDPLLLKFAALDFNILQANHQEELKLISSWWNSTGLMKQLDFVR
DRITESYFWTIGIFYEPEFKYYRKILTKLFMLIAIMDDIYDIYGTLEELEIFTNVVERWD
VNLVERLPEYMQICFLFLYNEINQIGYDVLRDKGRNIIPYLKQVWTDLFKAFLTEAKWYK
TGHKPSFNEYMQNGLISSSVPTILLHFFSILCDQISDQNLTDVSKNHHSIVRSSATILRL
ANDLATSTEEMARGDSPKSVQCYMYETGAKEDAAREQMQSMIIDSWDVINSAAHTSSLPS
GFVAAAANLNRVVQCIYQHGDGHGCPEKAKIVDHIQSVLFNPVPFQM
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctactcacgatatctccttcagttcagcttttgtctgcaatgctcttcatcaaaag
tctgagcattttctttgcaacaccgtctccaaagtgacgtcggctcaggctgtcaccgtc
aggcgccgctccgccaactattgtccgtctctctgggatcatcagtatcttctatcactg
gagaatatatatgcgaaagaagttgaatcaacggagaaagctaaattgttgaaggaagag
gtgagggagacattagttaagactcaaggttctcttgagcagctagagatgatcgattcc
ttgcaaagactcggaatatcttatcattataaacacgaaatccatgatattttgaaaaga
atttacgagcaacaccacgaaattgggagggagtcaccagatctccatgcgacagcactt
ggctttttcctcctaaggcaacatagctttgatgtctcacaagatgattttgacatcttc
aaaagtgaaaatggaatattcagaaagactttacccatcaagggtgtactctctctatac
gaagcttcttatttttcaatggattcagagtttaaactcaaggaggctagatgttttgca
aatgagcgattaaccgagtttatcgcggagaatagcacaactattttggggacaaatgaa
acttatatcttagacatggtgaaacgagccctagtgaatccgtaccattggagcactagg
agaatagaagcaagatggtacatagatgtgtaccggaaaaagcatgatatggatccactc
ttgctaaagtttgcagcacttgatttcaatattttacaagcaaatcatcaagaagagctt
aaattaatttcgagctggtggaacagcacaggacttatgaaacaacttgattttgtaaga
gaccgaatcacagagagttacttttggacaattggaatattttacgaaccagagtttaaa
tactaccgcaagatactcactaaattattcatgttgattgcgatcatggatgacatctac
gatatctatggtacattagaggagctcgagattttcacaaatgtggtcgaaagatgggat
gtgaatttagtcgaaagacttccggaatacatgcaaatttgttttctatttctatacaat
gagatcaatcaaattggttatgatgtgctcagagacaaaggacgtaacatcatcccttac
ctcaaacaagtttggacggatctattcaaagcgttcctaaccgaagcgaagtggtacaag
actggacacaaaccaagttttaacgaatacatgcaaaatggtttgatctcgagttctgtt
ccaacgatattgctccactttttctctatcctctgcgaccagatatcagaccaaaatcta
accgatgtgtctaagaaccaccactctattgtcaggagctcagccaccattctccgtctc
gccaatgatcttgccacctcaactgaagagatggcaagaggagattcaccaaagtcagtc
caatgctacatgtacgagacaggagccaaggaggatgcggcacgcgaacagatgcaaagt
atgatcatcgactcgtgggacgtcataaactccgcggcacacacttcttctcttccaagt
ggtttcgtggcagctgccgcaaatcttaaccgcgtggtacaatgtatataccagcacggt
gatggccacggctgtcccgagaaagccaagatcgttgatcacatccagtccgtactcttc
aatcccgttccatttcagatgtaa
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