Brassica rapa (field mustard): 103871374
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Entry
103871374 CDS
T03449
Name
(RefSeq) DNA polymerase kappa isoform X1
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
103871374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brp03400
]
103871374
Enzymes [BR:
brp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
103871374
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
103871374
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
IMS_C
zf_UBZ
IMS_HHH
Motif
Other DBs
NCBI-GeneID:
103871374
NCBI-ProteinID:
XP_009147862
LinkDB
All DBs
Position
A06:complement(2154043..2158764)
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AA seq
660 aa
AA seq
DB search
MDDEGESSSNSPSRPWESYNTVFTNAKAGMEGVDKEKVQRIVYEMSKGSKYFQNEERKEA
LMKQKIEHMRDRCAKLSSSDLSNYQKVVDRRILELEATRDLSRVWLHVDMDAFYAAVETL
SNPSLKGKPMAVGGLSMISTANYEARKFGVRAAMPGFIARKLCPDLIFVPVDFSKYTHYS
DLTRKVFRNYDPNFIAGSLDEAYLDITEVCRERGLSGGEIAEELRSSVHSETGGLTCSAG
VAANRLLAKVCSDINKPNGQFVLQNDRSTVMTFISLLPIRKIGGIGKVTEHILKDALEIK
TCGDMVLKGSLLYALFTQSSADFFLSVGLGLGKTDTPEVRSRKSISSERTFAATGDERLL
YSKLAEIAEMLSDDMKKEGLMARTLTLKLKTATFEIRSRAVSLQRYTCSSEDILKHATKL
LKAELPVSIRLIGLRMSQFNEEARHSDPSQGTITKFIVQKGSSRQNLDDNDSFDLDASKN
CLGNDEMLSLSYASHETSYDQLKDVVEYEEQSVTPNQECKKKEDRTQVLEGDALLRKHKD
CKADSNAEKTEAVSVFPQMEPLVWVDGYRCNLCGIELPPSFVEERQEHSDFHLAQRLQNE
ESGPSSSTTPTSKRRILGKEKANSKPKKQKPNQKDGSKHIPIHTFFTKSNQNSNDETQKK
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaaggcgaatcatcgagcaatagtccgtcgcgtccatgggaatcatacaac
accgtcttcaccaacgccaaagccggaatggagggagttgacaaggagaaagtgcagagg
attgtgtatgagatgagtaaaggatccaagtacttccaaaacgaggagcgtaaagaagct
cttatgaagcagaagattgagcatatgcgtgataggtgtgctaagctctcttcctctgat
ctatctaactaccagaaggttgttgatagaaggatcttagagcttgaagctacgcgggat
ctatctagagtatggctgcatgttgatatggatgccttttatgctgctgttgagactttg
agcaatccttcgcttaaggggaaacccatggctgttggaggcttgtccatgatctccaca
gctaattatgaggcaaggaagtttggagttcgtgcagctatgccgggcttcattgctcgt
aaactgtgtccagatttaatatttgttcctgtggatttctccaagtatactcactacagt
gatttgacaagaaaagtttttaggaactatgatcctaactttatcgctgggagcttggat
gaagcctaccttgacataactgaggtttgtcgagaaagaggtctctcaggtggagaaatt
gcagaggagcttagatcttctgttcattccgagactggaggactgacatgcagtgcggga
gtagcggctaaccgattgcttgccaaggtttgctcagacataaacaagcctaatggacag
tttgttttacagaatgatcgatcaactgtcatgacattcatctctttacttcctataaga
aagattggaggaatcggtaaagttaccgagcatattctgaaggatgctttagaaattaaa
acatgtggggacatggtgctgaagggatctcttctctacgctctctttactcagtcttca
gcagactttttcctctctgttgggctggggcttgggaaaacagacactcctgaggttagg
tctcgtaaaagtattagcagtgaaaggacgtttgctgcgacaggagatgaaagattgcta
tactcaaagttagctgaaattgcagaaatgctatctgatgacatgaaaaaggagggtctg
atggcaagaacactgacacttaaactgaaaactgcgaccttcgagattaggagcagagct
gttagcctgcagaggtacacatgttcaagcgaggatattctaaagcatgctacaaagctg
ttgaaggcggaacttcctgtttccataaggctgatagggttgcgaatgtctcaattcaat
gaagaagcccgccattctgatccttcacagggaactattaccaagttcatcgttcaaaag
ggttcctcaaggcaaaatctggatgataatgactcatttgacttagatgctagtaaaaat
tgtttaggcaacgatgagatgttgagtttatcctatgcttctcatgagacaagctatgat
caactgaaagatgttgtcgaatatgaagaacaatcagtaactccaaatcaagaatgtaag
aaaaaggaagataggacacaagtattggaaggagatgctctgctcaggaaacacaaggat
tgcaaagcagattcaaatgcagaaaagaccgaagcagtttcagtatttccgcagatggag
ccgttagtatgggttgatgggtacagatgcaacttgtgtgggatcgagctacctccatct
tttgttgaggaacggcaagaacattctgatttccatctcgcccagagacttcaaaacgaa
gagtctggccctagttcttccacaacacctacttcaaaacgaaggattctcggaaaggaa
aaggcaaattccaagccaaagaagcagaaaccaaatcaaaaggatggtagcaaacacatt
ccaatacacacattcttcacaaagagcaatcaaaactcgaacgacgaaacccagaagaaa
tga
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