Bradyrhizobium amphicarpaeae: CIT40_24815
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Entry
CIT40_24815 CDS
T05700
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
brq
Bradyrhizobium amphicarpaeae
Pathway
brq00540
Lipopolysaccharide biosynthesis
brq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CIT40_24815 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
brq01005
]
CIT40_24815 (lpxC)
Enzymes [BR:
brq01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
CIT40_24815 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
brq01005
]
Lipid A
CIT40_24815 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
AWM02935
UniProt:
A0A2U8PZI1
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All DBs
Position
complement(5678167..5679129)
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AA seq
320 aa
AA seq
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MKFSRQTTLRAQASVAGVGVHSGLPVTLTIGPAPVDAGFIFVRTGLEGRDREVQATAQQV
VATDLATVLGDDDGPLVSTAEHILAALRGMGVDNATIEIDGAEVPIMDGSAAAFVAAIDQ
AGIVNQSAQRRFIQVLKPVSVAIGDSFGELRPCADGFRIQIEIDFANPVIGRQSYSLELA
PERFRREVARARTFGLMCDQARLWAAGYGRGASFDNTVVFDEERLLNPEGLRYADECARH
KVLDVIGDLALAGLPLLGAYRSVRGGHKLNHAVLTALLADRTAWRVVEGEVARRTTRPVG
EVGRGIVGGRIAAAYGPDVS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagccggcaaacaacgcttcgtgcgcaagcctccgtggcaggcgtaggcgtt
cattccggtcttcccgtcaccctcacgatcggacctgcacctgtcgatgcgggttttatt
tttgtccgcaccggtctcgaggggcgggatcgcgaggttcaggcgaccgcgcagcaggtg
gtcgcgacggatctggcgaccgtactgggcgacgatgacggaccgcttgtttccacggcc
gagcacattttggcggctctgcgcggaatgggcgtggacaatgccacgatcgagatcgac
ggtgcggaagtgccgatcatggacggcagtgcggcggccttcgtcgctgcgattgatcag
gccgggatcgtcaaccagtcggcgcaacgccgcttcattcaggttttgaagccggtttct
gtcgcaatcggcgactcctttggcgagttgcggccctgtgccgatggtttccgcattcag
atcgagattgactttgccaaccccgtgattggccggcagagctattcgctggagctcgcg
ccggagcgcttccgccgagaggtcgcacgtgcccggactttcggtctgatgtgcgatcag
gcgcggctctgggctgctggctacggccgcggtgcttccttcgacaataccgtcgtgttc
gatgaggagcggctgctcaatcccgaggggctgcgctacgccgacgaatgcgcccgccac
aaggtgctggacgtgatcggcgacctcgcgctggctggcctgccgctgcttggcgcgtac
cgctcggtacgtggcggccacaagctcaaccatgctgtcctgaccgcgctgctcgccgat
cgtaccgcctggcgggtggtcgagggcgaggtggcccgtcgtaccacgcgtcccgtgggc
gaagtcggtcgtggtatcgtcggcggccggatcgctgcggcttacgggccggacgtgtcc
tga
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