Bradyrhizobium amphicarpaeae: CIT40_27505
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Entry
CIT40_27505 CDS
T05700
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
brq
Bradyrhizobium amphicarpaeae
Pathway
brq01501
beta-Lactam resistance
brq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
brq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CIT40_27505
01503 Cationic antimicrobial peptide (CAMP) resistance
CIT40_27505
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
brq02000
]
CIT40_27505
01504 Antimicrobial resistance genes [BR:
brq01504
]
CIT40_27505
Transporters [BR:
brq02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CIT40_27505
Antimicrobial resistance genes [BR:
brq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CIT40_27505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WWE87889
LinkDB
All DBs
Position
complement(6227816..6230983)
Genome browser
AA seq
1055 aa
AA seq
DB search
MASFFIDRPIFAWVVALFICLIGAIAVPLLPIAQYPIIAPPSISISTSYPGASPENLYNS
VTRLIEEELNGASGILNFESTSDSLGQVEIIANFQPGTNTNDASVEVQNRIKRVEARLPR
AVMQQGILVEEASSAVLQIITLSSTDGSLDEVGLGDFMIRNVLGEVRRIPGVGRATLYST
ERSLRVWVDPAKLVGYGLTADDVNKAIAAQNAQVASGSIGAEPSTSNQRTSALVLVKGQL
SSPDEFGAIILRANADGSTVRLRDVARIEVGGLSYQFNTRLNGKPTAGLSVLMSPTGNAL
ATASAVEEKMKELSRFFPANITYEIPYNITPVVEASIEKVLSTLVEAVVLVFVVMFLFLQ
NIRYTIIPTIVVPVALLGACTVLLLAGYSINMLSMFGMVLAVGILVDDAIVVVENVERIM
AEEGLPPKEATRKAMSQISGAIIGITLVLMAVFVPMAFFPGSVGIIYRQFSVTMVAAIGF
SAFLALSLTPALCATLLKPVAAGHGHAKRGVFGWFNRMLDGGRDGYSRTVGFSLKRTGRL
MLVYVALLVGLSWAFVNLPGGFLPIDDQGFVTTDVQTPSDSSYSRTESVIEKVEKYLAER
PGVKDVTFLTGFSFSGQGMNTAQAFITLKDWSERGPKDSAAAIVNDINRDLGASIRDAKI
AALQPPPIDNLGNSSGFSFRLQDRGQKGYQQLMRAADQLIAEANASPVLQKVYVEGLPEA
GVVNLVIDREKAGAFGVTFEDINNTISTNLGSNYINDFPNRGRMQRVVVQADARDRMRTE
DILNYNVKNSRGQLVPFSSFATVEWARGPTQIAGFNYYPAVRISGEARPGFTSGDAIAEM
ERLAGKLPRGFGYEWTGQSLQEKLSGSQAPFLLALSVFVVFLCLAALYESWTIPLAVLLT
VPLGIVGAVIAAMLRGLPNDVYFTVGLITIIGLAAKDAILIIEFAKDLRKEGKPLVDATI
EACRLRFRPILMTGLAFICGVLPMAIAHGAGGASQQALGSIVMGGMIAVVILALLMVPVF
FVSVQRVLGGDREPKMHQLAEPASYAAAAPTHEGG
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtttcttcatcgacaggccgatcttcgcctgggtggtcgcgctgttcatatgt
ctgatcggcgcgatcgcggtgccgctgctgccgatcgcgcaatatccgatcatcgcgccg
ccctcgatctcgatctcgaccagctatcccggcgcttcgcccgaaaacctctacaacagc
gtcacgcggctgatcgaggaggagctcaacggcgcctccggcatcctcaatttcgaatcg
accagcgactcgctcggtcaggtcgagatcatcgcgaatttccagccgggcaccaatacc
aacgacgcctcggtcgaggtccagaaccgcatcaagcgcgtcgaggcgcgcctgccgcgc
gcggtgatgcagcagggcatcctggtcgaggaagcctccagcgcggtgctgcagatcatc
acgctcagttcgaccgacggcagcctcgatgaggtcggcctcggcgacttcatgatccgc
aacgtgctcggcgaagtccgccgtattcccggcgtcggccgcgccacgctctattcgacc
gagcgatcgcttcgcgtctgggtcgatcccgccaagctggtgggctacgggctcaccgcc
gacgacgtcaacaaggccatcgccgcgcagaacgcgcaggtcgcctcgggcagcatcggt
gccgagccgtcgacgtcgaaccagcgcacctccgcgctggtgctggtcaagggccagctg
tcctcgccggacgagttcggcgccatcatcctgcgcgccaatgccgacggttcgaccgtg
cggctgcgcgacgtcgcacgcatcgaggtcggtggtctcagctaccagttcaacacgcgc
ctgaacggcaagccgaccgccggcctgtcggtgctgatgtcgccgaccggcaacgcgctg
gcgaccgcgagcgcggtcgaagagaagatgaaggagctgtcgcgcttcttcccggccaac
atcacctacgagattccctacaacatcacgccggtggtcgaggcctcgatcgagaaggtg
ctgtcgaccctggtcgaggccgtggtgctggtgttcgtggtgatgttcctgttcctgcag
aacatccgctacaccatcatcccgaccatcgtggtgccggtggcgctgctgggcgcctgc
acggtgctgctgctcgccggctactccatcaacatgctcagcatgttcggcatggtgctc
gcggtcggcatcctcgtcgacgacgccatcgtggtggtcgagaacgtcgaacgcatcatg
gcggaggaggggctgccgccgaaggaggcgacgcgcaaggcgatgtcgcagatatcgggc
gccatcatcggcatcacgctggtgctgatggcggtgttcgtgccgatggcgttcttcccg
ggatcggtcggcatcatctaccggcagttctccgtgaccatggtcgcggcgatcggcttc
tccgccttcctggcgttgtcgctgacgccggccctgtgcgcgaccctgctcaagcccgtc
gcggccggccacggtcatgcgaagcggggcgtgttcggctggttcaaccgcatgctggac
ggcggcagggacggctattcacgcaccgtcggcttctcgctgaagcgcaccggccgcctg
atgctggtctacgtcgcgctgctcgtcggtctgtcctgggccttcgtcaatttgcccggc
ggcttcctgccgatcgacgaccagggtttcgtcaccaccgacgtgcagacgccgtcggat
tcgtcctactcccggaccgaatccgtgatcgagaaggtcgagaaatatctcgccgagcgt
ccgggcgtgaaggatgtcaccttcctcaccggcttcagcttttccggccagggcatgaac
accgcgcaggccttcatcacgctgaaggattggtcggagcgcggaccgaaggattccgct
gcggccatcgtcaacgacatcaaccgcgatctgggggcctcgatccgcgacgcgaagatc
gccgcgctgcagccgccgccgatcgacaatctcggcaactcctcgggtttctcgttccgc
ctccaggatcgcggccagaagggctatcagcaattgatgcgcgccgccgaccagctgatc
gcggaggccaatgcgagcccggtgctgcagaaggtctatgtcgagggcttgcccgaagcg
ggcgtggtcaatctggtgatcgaccgcgagaaggccggcgccttcggcgtcaccttcgag
gacatcaacaacacgatctcgaccaatctcggctcgaactacatcaacgacttcccgaac
cgcggccgcatgcagcgcgtcgtggtgcaggccgacgcccgcgaccgcatgcggaccgag
gacatcctcaactacaacgtcaagaacagccgcggccagctcgtgccgttctcgtctttc
gccacggtcgaatgggcccgcggtccgactcagatcgccggcttcaactattatccggcg
gtgcgcatctccggcgaagccaggcccggcttcacctcgggcgatgcgatcgccgagatg
gagcggcttgcgggaaaactgccgcgcggcttcggctatgaatggaccgggcagtcgctg
caggaaaagctatcgggctcgcaggcgccgttcctgctggcgctgtcggtgttcgtggtg
ttcctgtgcctggccgcgctctacgagagctggaccattccgctcgcggtgctgctcacc
gtgccgctcggcatcgtcggcgccgtgatcgcggcgatgctgcgcggcctgcccaacgac
gtctatttcaccgtgggcctgatcaccatcatcggccttgcggccaaggacgcgatcctg
atcatcgagttcgccaaggatctgcggaaagagggcaagcccttggtggacgccaccatc
gaggcctgccgcctgcgcttccgcccgatcctgatgaccggcctcgccttcatctgcggc
gtgcttccgatggccatcgcccacggcgccggcggcgccagccagcaggcgctcggctcc
atcgtgatgggcggcatgatcgccgtggtgatcctggcgctcttgatggtgccggtgttc
ttcgtctcggtgcagcgcgtgctgggtggggatcgggagccgaagatgcatcagttggcc
gagcctgcgtcgtatgcggccgcggctcccacccacgagggcggttaa
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