Bradyrhizobium cosmicum: S23_13260
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Entry
S23_13260 CDS
T01796
Symbol
ragC
Name
(GenBank) cation efflux protein
KO
K18138
multidrug efflux pump
Organism
brs
Bradyrhizobium cosmicum
Pathway
brs01501
beta-Lactam resistance
brs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
brs00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
S23_13260 (ragC)
01503 Cationic antimicrobial peptide (CAMP) resistance
S23_13260 (ragC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
brs02000
]
S23_13260 (ragC)
01504 Antimicrobial resistance genes [BR:
brs01504
]
S23_13260 (ragC)
Transporters [BR:
brs02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
S23_13260 (ragC)
Antimicrobial resistance genes [BR:
brs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
S23_13260 (ragC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
ZT_dimer
Motif
Other DBs
NCBI-ProteinID:
BAL74543
UniProt:
A0AAI8QAH9
LinkDB
All DBs
Position
1401967..1405149
Genome browser
AA seq
1060 aa
AA seq
DB search
MGIVRFALRLPHTFYVLAALILFLGGIAIRSMPTDIFPEIRIPVVTVIWSYTGLSTPEME
QRVSTYSQYSISANVSGIKNIEAQTLNGLSVQKIYFQPDVNLDLAISQIVSATNAIRALM
PPGIQPPIIVQFNASSVPVLQLSLESNSLNEQQLYDFGIYRVRQQLAPVPGVTLPTPAGG
KYRQIMVDLDPNKLLSRGLTPLDIVNAVNTQNLTLPTGTTKIGDTQYTVRTNATPATIQD
LNMIPVKFVNGATIFLKDVAQVRDGAQVQQNIVREDGHRAVLLSVIKNGNASTLAVVNGV
KAALTSIRASAPAGLKVNELFDQSIFVTHSVDGVLREGAIAAGLTALMILVFLGSWRSTL
VVLISIPLAMLSSLIVLYFLGETLNTMTLGGLALAVGILVDDSTVTIENTHRLWTEEGMP
LSEATLHGAAEIAVPTLVSTLAISCVFTSVVFLEGPAKYLFTPLGLAVVFAMLASYGLSR
TLTPITIGLLLKGERRHREGERPSNIFARASAAFERGFERLRDGYSDLLDRLLRHRVIVP
VVATLVLALGATMFACVGRDFYPLIDGGQIQLHVRAPAGTRIERTEAIFQAVEDKIREVI
PERDRALIVDNIGLPARAYNLAFTDGSTIGVNDGVILVSLKDGHKPTADYVKTLRQVLPS
AFPEDTFYFQAADIVTQILNFGLPAQVDVRTVGYGNNNLAVAKELQKSLAAIPGVVDAHL
QQEVDAPAFYADIDRTRAAQLGLNASTVATNINVSLSSSAQVSPNFWTDPTSGIPYYLAV
QTPEYRANSLNALGNTPVSASLAASGQPVPGLLSNVATFKRGTVPTNSNQANVQPVYDVY
ASVQGRDLGSVAADIEKVTSTLQKQLQPGNSIQVLGQIQSMHQSFRDLGIGLLFAAILVY
LLMVVNYQNFGDPFVVIMALPATFCGIVTMLFITGTTLNVPSLMGAIMAIGVASANSILL
VTFARDEQLKGHSAFQAALSAGRTRIRPVLMTAAAMIVGMIPMAIGGPGEEQNAALARAV
IGGLLFATPTTLLIVPYLFAMLRKGNDGKPHHGVFEEQPE
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgggaattgttcgcttcgcgctccggcttccgcacacattctatgtgcttgcggcgctg
atcctgttcctcggcggcatcgcgatccgctcgatgccgacggatatcttcccggagatc
cggatccccgtcgtcacggtcatctggagctacaccggcctttccacgccggagatggag
cagcgcgtcagcacctacagccagtattcgatcagcgccaatgtcagcggaatcaagaat
atcgaagcgcagaccctcaacggcctttcggttcagaagatctacttccagccggacgtc
aatctcgatcttgcgatctcgcagatcgtctcggccacaaacgccatccgcgccctgatg
ccgccgggtatccagccgccgatcatcgtgcagttcaacgcctcgagcgtgccggtgctc
cagctcagtctcgaatcgaacagcctgaacgagcagcagctctacgatttcggcatctac
cgcgtccgccagcaactggctcccgttccgggcgtgacgttgcccacgcctgctggtggc
aaataccgccagatcatggtcgacctcgatccgaacaagctgctgtcgcgcggattgacg
ccgctcgatatcgtcaatgcggtgaacacccagaatctgacgctgccgaccggaacgacc
aagatcggcgacacccagtacacggttcgaaccaatgcgacgccggccacgatccaggat
ctcaacatgatcccggtcaagttcgtgaacggggccacgatcttcctgaaggacgtcgcc
caggtccgcgacggcgcccaggtccagcagaatatcgtgcgcgaggacggccaccgcgcc
gtcctgctcagcgtcatcaagaacggaaacgcatccacgctcgccgtcgtcaacggcgtg
aaggcggccttgacgtcgatccgcgcgtcggctccggcggggctgaaggtcaacgagctg
ttcgaccagtcgatattcgtcacccactcggtcgatggcgtgctgcgcgaaggcgcgatc
gcggccgggctcacggcgctgatgatcctggtgtttctggggtcgtggcgatcgacgctg
gttgtcctgatctcgatcccgctggcaatgctgtcctcgctgatcgtcctgtatttcctc
ggcgagaccctcaacacgatgacactcggcgggcttgccctcgcggtcggtatccttgtc
gacgattcgacggtgacgatcgagaacacgcaccggctctggaccgaggaaggcatgccg
ttgtcggaagcgaccctgcacggagccgctgagatcgcggtgccgacgctggtctcgacg
ctcgcgatcagctgcgtgttcacctcggtcgtgtttctggagggcccggccaagtacctc
ttcacgccactcggcctcgccgtggtgttcgcaatgctggcgtcctacgggctgtcgcgg
acgctcacgccgatcaccatcggcctgctgctgaaaggcgagcggcgccatcgcgagggc
gagcggccgtcgaacatattcgcgcgcgcctccgcggcgttcgagcgcggcttcgagcgc
ctgcgcgacggatattcggatctcctcgacagactgctacgacatcgcgtcatcgttccc
gtcgtggccacgctggtgctggcgctcggcgccaccatgttcgcctgtgtcggcagggac
ttctatcccctgatcgacggcggccagatccagctccacgttcgcgcgcccgcgggcacg
cggatcgagcggacggaagcgatcttccaggcggtggaggacaagatccgcgaggtcatt
ccggagcgcgaccgggcgctgatcgtcgacaatatcggcctgccggcgcgcgcctacaat
cttgcattcactgatggctcgaccatcggggtgaacgacggcgtcatcctggtgtcgctg
aaggatgggcacaagccgactgcggattacgtcaagacgctgcggcaggtgctcccatcg
gccttcccggaggacacgttctatttccaggcggcggatatcgtcacgcagatcctgaat
ttcggacttccggcgcaggtcgatgtccgcacggtcggttacggtaacaacaacctcgcc
gtcgccaaggagctgcagaagagcctcgccgcgatccccggcgtcgtcgatgcgcatcta
cagcaggaggtcgatgctcccgcgttctacgccgatatcgaccgcacccgcgccgcgcaa
ctgggccttaatgccagcacggttgcgaccaatatcaatgtcagcctcagctcgtcggcg
caggtctcgccgaatttctggacggatccgacgtcgggcatcccctattacctggcggta
caaacgccggaatacagggccaattcgctgaacgccctgggaaacactccggtgtcggcc
tcgcttgccgcaagcgggcagccggttcccggcttgctcagcaatgtcgcgaccttcaag
cggggcaccgttcccaccaattcgaaccaggccaatgtccagccggtgtacgacgtctat
gcgagcgtgcagggtcgcgatctcggcagcgtcgcggccgacatcgagaaggtgacgtcc
accctgcagaagcagctgcaaccgggcaattcgattcaagtcctgggacagatccagagc
atgcatcagtcgttccgcgatctcggaatcggattgctgtttgcggccatcctcgtctac
ctgctgatggtcgtgaactaccagaacttcggcgatccgttcgtcgtcatcatggcgctc
ccggcgacattctgcggcatcgtgacgatgctgttcatcaccgggacgacgctgaatgtg
ccgtcgctgatgggagccatcatggcgatcggcgttgcctcggcaaattccatcctgctc
gtgactttcgcgcgcgacgagcagttgaaggggcactcggcgttccaggcggcactcagc
gccggccggacgaggatcaggcctgtgctgatgactgcggccgcgatgatcgtgggcatg
atcccgatggcgatcggcgggccgggcgaggagcagaatgccgcgctcgcgcgggcggtc
atcggcggcctgctgttcgcgaccccgacaaccttgctgatcgtgccttatctcttcgcc
atgctgcgcaagggcaatgacggcaagcctcaccacggcgtattcgaggagcaaccggaa
tga
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