Bipolaris sorokiniana: COCSADRAFT_136512
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Entry
COCSADRAFT_136512 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K15083
DNA repair protein RAD16
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsc03400
]
COCSADRAFT_136512
DNA repair and recombination proteins [BR:
bsc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
COCSADRAFT_136512
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
zf-C3HC4
DEAD
AAA_34
zf-RING_UBOX
DRAT
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
19131018
NCBI-ProteinID:
XP_007697137
JGI:
Cocsa1_136512
UniProt:
M2TE24
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MALRRSTRKSTNSLANDVTPASSSVPAAKMKDSPAMDGRHQQKRTRASRTFVPNSSDQES
NTIEAIVPKESTQTRRVLKAVSIPASKTQKTPATRSRLSSVNARQAEQESSTGSPSLENS
DYETPGTSISTTPAASVDRGKTPARRGRNKVTTPSQSSASISKRSHDMVLDSDSDSESVP
VDMDAEIALQMQLEDEMDMPRSKRQKTEEEDEDEDMEENEDEDEVSELDELDSPPPYIGK
GKGKAPDVPVKRGRSARSSAKKKGKFTEDDFIDDEESDGGEFQPDEHEEHDDLESLIALE
EAMLPSDSDEEPLKKTAARLRKLAAARPARVARGTKKQLTHDERVEAHGRRARFAHIADK
WERKRAMNRERAEQQHPKLRTMWDDLKKIPVLEVQKAEQPQSINRRLKPFQLEGLSWMIR
QEQTHYKGGLLGDEMGMGKTIQAVSLIMSDYPAKQPTLVCVPPVALMQWTNEIREYTDNK
LKVLVYHGTNAKCKKMTVKELKSYDVIMVSYNSLESLHRKETKGWSRGEDIIKEASPLHA
IYYHRLILDEAHSIKSRNTGVAKACFALRSDYKWCLSGTPVQNRIGEFFSLLRFLEVRPF
ADYFCRSCDCEKLHWATNDDHMCVACNHGASEHISVFNQELLNPITGDDPELREEALTKL
HLITARIMLRRMKRDHTNSMELPMKDIIIHNEFFSEVERDFSTSIMSNSSRKFDTYVAQG
VMLNNYANIFGLIMQMRQVANHPDLLLKKKAGEGASNVYVCNICDEPAEDAVRSHCRHEF
CRACIKDFMDTCEASGTEADCPRCHIALSIDFEQPELEQDEDSVKKTSIINRIKMENWTS
STKIEMLVYDLYKLRSKKQTLKSIVFSQFTSMLQLIEWRLRRAGFNTVMLDGSMTPAQRQ
KSIDHFMTNPDVEVFLVSLKAGGVALNLTEASRVFIVDPWWNPAAEWQSADRCHRIGQRR
PCVITRLCIEDSVESRMVALQEKKAAMIAGTVNNDKVAMDRLSPEDLQFLFRGT
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcggcgatctacccgcaagtcaaccaacagcctcgccaacgatgtcaccccc
gcaagctcatctgttcctgcagctaaaatgaaagattccccagcaatggatggtcgccac
cagcagaaacgcactcgcgcttctcgcacctttgttccgaactcctccgatcaagagagc
aatacgattgaagccattgtgcccaaagaatctacacaaactcgccgggttcttaaggca
gtctcgatccccgcttccaaaactcagaagacgcctgccactcgcagtcggctctccagt
gtcaacgcccgacaggcagaacaggagagttcaactggctcaccttcgctagaaaactca
gactatgaaaccccaggaacgagcatatcaactacaccagctgcttcagttgaccgtgga
aagacgcccgctcgccgtggacgcaacaaggtcaccacgccgtcgcaaagtagcgcatcg
atttcgaaacgatcccacgacatggtgttagactcagactcagactctgaaagtgtccca
gttgacatggatgcggagattgctctacaaatgcaactcgaggacgaaatggatatgccg
cgaagcaagcgtcagaagacggaagaagaggatgaagacgaagatatggaagaaaatgaa
gacgaagacgaagtttcagagttggatgagctggactcgccacctccctacatcggcaaa
ggaaaaggcaaagctccagatgttccggtcaagcgtggtcgctctgcccgctcaagtgcg
aagaagaagggcaaattcacagaggatgacttcattgatgacgaagaatctgatggtgga
gagttccaacctgacgagcatgaagagcatgatgatcttgagtccttgatagctcttgag
gaggcgatgcttccaagcgacagcgacgaggagccactaaagaaaaccgctgcacgcctg
agaaagcttgctgcagcgaggccagccagggtggctcgaggcactaagaagcagttgacc
cacgatgagagggttgaagcacatggacgacgagctaggtttgcgcacattgcggataaa
tgggagcggaagcgcgccatgaaccgtgagcgagcagaacagcagcaccctaaactacgc
accatgtgggatgatttgaagaagattcctgttcttgaggttcaaaaggcagagcagcca
cagtcaatcaataggcgactgaagccattccaacttgagggactcagttggatgattcgc
caggaacagactcattacaagggtggtctactcggagacgagatgggcatgggcaagact
atccaggctgtctccctgataatgtctgattaccctgcgaaacaacctacgcttgtgtgc
gttccacccgttgctcttatgcagtggacgaatgagatacgcgagtacacagacaacaag
cttaaggttctcgtgtatcacggcacaaacgccaagtgcaaaaagatgacagtcaaggag
ttgaagtcttacgacgtcatcatggtctcctacaattctttggaatcgctgcatcgcaaa
gagacaaaaggatggtcccgcggagaagatatcatcaaggaagcgtcgccactccacgcc
atctactaccaccgcctcatcctggacgaagcgcacagcatcaagtcacgcaacacgggt
gtagccaaggcttgttttgcgttgaggagtgactacaagtggtgcttgtccggtacacca
gttcagaaccgtattggagagttcttttcactccttcgcttcttggaggttcgtcccttt
gcggattacttctgccgttcgtgtgattgcgagaagctccactgggctacaaacgacgac
catatgtgtgtcgcctgcaaccatggagcgtccgagcacatttccgtgttcaaccaggag
ttgcttaatcccatcactggtgatgaccccgagcttcgagaagaggccttgaccaagctt
caccttatcactgctcgtatcatgttgcgacgcatgaagcgcgaccacactaactccatg
gagcttcctatgaaggatatcatcatccacaacgagttcttcagtgaagtggagcgtgac
ttctcgacctcaatcatgtcaaactcttcgcgcaagttcgatacgtatgttgcgcagggt
gttatgctcaacaattacgccaatatcttcggtctgattatgcagatgcgtcaagtcgcc
aaccatcctgatctgctacttaagaagaaggcaggcgaaggcgctagtaatgtctatgtc
tgtaatatctgcgatgaaccggctgaagatgctgttcgctctcattgtcgccacgagttc
tgtcgtgcttgtatcaaagacttcatggacacttgcgaggcctcaggaaccgaggctgac
tgtcctcgctgtcacatcgcgttgtctattgactttgagcagcctgagcttgagcaagat
gaggattctgtaaagaagacatcgattatcaatcgcatcaagatggagaactggacttct
tctaccaagattgagatgttggtgtatgatctgtacaagctccgaagcaagaaacagaca
ctcaagtcgatcgtcttcagccagtttacttctatgttgcaactgattgagtggcgtctt
cgtcgcgccggtttcaatacggtcatgttggatggtagcatgacgcctgcccagcgacag
aagagcattgatcatttcatgacgaacccggatgtcgaggttttcctggtgtctttgaag
gctggtggcgttgccctcaatctgaccgaggcttctagagtgttcattgtcgacccatgg
tggaaccccgctgccgagtggcagtctgcagatcgctgtcatcgtatcggtcaacgtcgt
ccctgtgtcattacacgtctttgcattgaggacagtgttgagtcgcgtatggttgcgctg
caggagaagaaggcggccatgattgctggaacggtcaacaatgacaaggttgccatggat
cgccttagtcctgaggatttgcagttcttgttccgtggtacttaa
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