Bipolaris sorokiniana: COCSADRAFT_38012
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Entry
COCSADRAFT_38012 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc00260
Glycine, serine and threonine metabolism
bsc00270
Cysteine and methionine metabolism
bsc00670
One carbon pool by folate
bsc01100
Metabolic pathways
bsc01110
Biosynthesis of secondary metabolites
bsc01230
Biosynthesis of amino acids
Module
bsc_M00035
Methionine degradation
bsc_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
COCSADRAFT_38012
00270 Cysteine and methionine metabolism
COCSADRAFT_38012
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
COCSADRAFT_38012
Enzymes [BR:
bsc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
COCSADRAFT_38012
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALP
CBS
DUF7317
Motif
Other DBs
NCBI-GeneID:
19139142
NCBI-ProteinID:
XP_007701048
JGI:
Cocsa1_38012
UniProt:
M2T2A0
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MSTKTRPAMPPVVMNSIMEQIGNTPLVRLNKIPQSLGIRATVYAKVEAFNAGGSVKDRIA
LRMIEAAEKSGRIKPGDTLIEPTSGNTGIGLALVGAVKGYRTIITLPEKMSPEKVAVLKA
LGAEIIRTPTSAAWDSPESHIGVARRLVKEIPNAHILDQYSNVDNPLAHECGTAEEVWAQ
TEGKVTMLVAGAGTGGTITGLARGLRKHKQDVKIIAADPHGSILALPASLNDEHVNEGYK
VEGIGYDFIPDVLEQKIVDKWYKTDDRSSFQYARRLIAEEGILCGGSSGSAMAAMVEAAR
DMNLTEDDVVVVILPDSIRSYLSKFVDDDWLAANDLLPPTPPHSPDSNAHLRRLSTSKKS
DPFHGATIASLRLKPVTTVAANSPCSEAIETMREKGFDQLPVSVYSSSGKARLVGLVTLG
NLLSYIAAGRATPKSPVEDVMFDFRKLNEVVKDLGRLSLDGDNAKNTQKGGKKGRREFVE
ITKETTLTDLNKFFEWNSAAVVTEQVDGEHRAVAVVTKVDLLTWMVRQGGANGASN
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccaaaacgcgccccgccatgccacccgttgtcatgaacagcatcatggaacaa
attgggaatacgccactcgtccgtctgaataaaatcccacagtcgcttggcatccgagct
acggtttacgcaaaagttgaggctttcaacgctggtggcagtgtcaaagaccgcattgcc
ctgcgcatgatcgaggccgcagaaaagtctggtcgcataaagcctggtgacacactcatt
gagcctacctctggtaacactggtatcggacttgcgctagtcggagcagtcaagggatac
aggacaatcattactctccccgagaagatgagcccggaaaaggtagcagtgctcaaggcg
cttggcgctgagattatccgcacgcccaccagcgcagcgtgggatagccccgagagccac
attggtgttgcgcgaagactagtcaaggaaattcccaatgcgcatatccttgatcagtac
tcgaatgtcgataacccgcttgctcacgaatgcggcaccgctgaggaggtatgggcgcag
acagagggcaaggttactatgcttgttgccggcgctggaactggaggcacaattaccggt
cttgcacggggtctgaggaaacacaagcaagacgtcaagattattgcagccgatcctcat
ggaagtattctggcgcttcccgcaagtctgaacgacgagcatgtgaatgaggggtacaag
gttgagggaattggatacgatttcattcctgatgtcttggagcagaagattgtggacaag
tggtacaagaccgacgaccgatcttctttccagtatgcgcgcaggttgatcgctgaggag
ggtatcctctgcggtggctcttctggaagcgccatggcagctatggttgaggcggctcgg
gacatgaatctgactgaagacgatgtcgtggttgtcatactacccgacagcattcgcagc
tatctcagcaagtttgtcgatgacgactggctcgctgccaacgatctcctccctcctaca
cctccacactcacctgactccaacgcacacctccgccgcctctccaccagcaagaaatct
gatcccttccatggcgccaccattgcttctctgcgtctcaagcccgtcaccaccgtcgcc
gcaaactcaccttgcagcgaagccatagaaaccatgcgcgaaaagggcttcgaccaactg
cccgtaagcgtatactcctcatccggcaaggcccgactagtcggtctagtcactctcggt
aacctcctctcatacattgccgccggccgcgccacaccaaagtcgcccgtcgaagacgtc
atgttcgatttccggaagttgaacgaagtcgtcaaggacctcggccgtctctccctcgac
ggcgacaacgccaagaatacgcaaaagggcggcaagaagggacgaagagaatttgtcgaa
atcacaaaggagactactctgaccgaccttaacaagtttttcgagtggaatagtgcggca
gttgttactgagcaggttgatggtgaacacagagctgttgctgttgttaccaaggtggat
ttgctgacctggatggttaggcagggtggtgctaatggagcgtcgaattag
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