Bipolaris sorokiniana: COCSADRAFT_41602
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Entry
COCSADRAFT_41602 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
COCSADRAFT_41602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsc03019
]
COCSADRAFT_41602
Messenger RNA biogenesis [BR:
bsc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
COCSADRAFT_41602
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
FtsK_SpoIIIE
AAA
AAA_15
AAA_23
PduV-EutP
AAA_25
DUF3584
AAA_28
ORC-CDC6-like
SRP54
AAA_22
Zeta_toxin
RsgA_GTPase
Arf
nSTAND3
AAA_13
Motif
Other DBs
NCBI-GeneID:
19140022
NCBI-ProteinID:
XP_007705261
JGI:
Cocsa1_41602
UniProt:
M2S921
LinkDB
All DBs
Position
Unknown
AA seq
288 aa
AA seq
DB search
MSGATSSKEIAPSIDVKNLSYAFPDGSSGLKDVFLDLPPGSRTLLIGANGAGKTTLLRLL
SGKRMAPANTVHISGIDPFKMGLEGVTYLGLEWVLNPIVRTDIDVPTLLSSVGGDHYVER
RDELVRILDIDLSWRMHAVSDGERRRVQLAMGLLRPWTILLLDEITVDLDLLSRSNFLNF
LKKETETRPCTIVYATHILDNLATWPTHLVHMSLGKVKKWGSTEEMNVKVEAAGGQQYTG
NSQLGELVLKWLKEDLDERGPRNGKGEGLSYQNLEGKGGYGAEKRVED
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagcgacaagttcaaaagaaatcgcgccgtcgattgacgtgaaaaatctcagc
tatgcctttcctgatggctcgagtgggctcaaggatgtgtttctcgacctgccgccgggc
agcagaacattgctgatcggagccaacggtgcgggtaaaaccacattgttgcgtctcctc
tcgggcaagcgcatggcccccgccaacaccgtccacatctccggtattgaccctttcaag
atgggcttggagggcgtgacatatctcggcctcgaatgggtgctgaaccccattgtccgc
accgacattgatgttcctacgctcctttcctcggtcggcggcgaccactatgtcgagcgc
cgtgacgagctcgtgcgcatcctcgacatcgacttgagctggcgcatgcatgccgtctcg
gacggagagaggcggcgcgtgcagctcgctatgggtcttttgaggccgtggacaatcctg
ctgctcgatgagattacagtagacttggatctgctatcgcgcagcaactttctcaacttc
ttgaaaaaggagacggagacaagaccttgtacgattgtttatgcgacgcatattctggat
aaccttgctacatggccgacccatctggtacatatgagtctgggcaaggtgaagaagtgg
gggagcacagaggaaatgaatgtcaaggttgaggcggctgggggccagcaatacacgggg
aatagtcagttgggcgagctcgtgctcaagtggctcaaggaagatttggatgagagggga
ccgagaaatggaaagggagagggtctgagttatcaaaatttagaaggcaagggcgggtat
ggtgcagagaagagggtggaagattaa
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