KEGG   Bifidobacterium scardovii: BBSC_1929
Entry
BBSC_1929         CDS       T03975                                 
Name
(GenBank) CRISPR-associated protein
  KO
K19125  CRISPR system Cascade subunit CasD
Organism
bsca  Bifidobacterium scardovii
Brite
KEGG Orthology (KO) [BR:bsca00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:bsca02048]
    BBSC_1929
Prokaryotic defense system [BR:bsca02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    BBSC_1929
SSDB
Motif
Pfam: Cas_Cas5d
Other DBs
NCBI-ProteinID: BAQ32009
LinkDB
Position
complement(2311040..2311807)
AA seq 255 aa
MLPTKSGVIGMIAAALGIGREESLARFAGLRFGVRADQPGTLMSDYHTAKTEAGDMLPLS
RRYYLQDAVFLAGLESEDASALEEYRQALASPHYQLFLGRRSCPPDGPVQTWLSDEFLED
ALTHAPWRATEQYQRRALRDRSLFPERCFAEVVVEPRADGDLLGDFTDELADEPVSFDPQ
RRVWKPRRISRLSQEVRPDPTVSVPTTTPTPSHSGRLTQSGGNFGENAENTRSGDSALDG
DVFFQAVVNPEDKES
NT seq 768 nt   +upstreamnt  +downstreamnt
atgctcccgacaaaaagcggagtcatcggtatgatcgctgctgccttgggaatcgggcgt
gaggaatccctcgcccgatttgcggggctgcgtttcggagtgcgtgccgaccaaccgggc
acgcttatgtccgactatcatacagccaaaaccgaggctggggacatgctgccgctttca
cgacggtactatctgcaggatgcggtgttcctggctggcttggaaagtgaggatgcctct
gctctggaagaatataggcaagcgctggcttctccgcattatcagctttttttggggcgt
cgttcctgtccgccggatggaccggtgcagacttggctgtcagacgagtttttggaagat
gcgctgactcatgcaccgtggcgtgcgacggaacaatatcaacgacgtgcattgcgagat
cgaagtctgtttcccgagcgttgtttcgcagaggttgtcgttgagcctcgagcggatggg
gatctcctcggtgattttacggatgaactggccgatgagccggtgagtttcgatcctcaa
cggcgtgtgtggaagccgagacgcatttctcggttgtctcaggaggtacggcccgatccg
accgtatcggttccgaccacgactccgacgccaagtcacagtggacggttaacccaaagc
ggcggtaattttggtgagaatgcggaaaatacgcgctcgggtgattcggcacttgatggt
gatgtgtttttccaagcggtcgtcaatccggaggataaggaatcatga

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