Bifidobacterium scardovii: BBSC_1940
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Entry
BBSC_1940 CDS
T03975
Name
(GenBank) putative transport protein
KO
K08168
MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
Organism
bsca
Bifidobacterium scardovii
Brite
KEGG Orthology (KO) [BR:
bsca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bsca02000
]
BBSC_1940
01504 Antimicrobial resistance genes [BR:
bsca01504
]
BBSC_1940
Transporters [BR:
bsca02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-2 (14 spanner) (DHA2) family [TC:
2.A.1.3
]
BBSC_1940
Antimicrobial resistance genes [BR:
bsca01504
]
Gene variants
Tetracycline resistance genes
Transporters
BBSC_1940
Gene sets
Vancomycin resistance modules
Tetracycline resistance, efflux pump Tet38 [MD:
M00704
]
BBSC_1940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Motif
Other DBs
NCBI-ProteinID:
BAQ32020
LinkDB
All DBs
Position
complement(2330000..2331403)
Genome browser
AA seq
467 aa
AA seq
DB search
MSNTTATVIADPWADPKTSNSMAIKALIPLLITFILGTLCLQGFNLVFTQVGEDVGAAAQ
ASLITAIPSIVLGIVCFIYGSLGDFVSLKKLVVVGLITLFVGSVFGFVANFFFAANLWTV
IIARVLQTAGEQVAGSAFLVVASKYLKPSLKVVFFGLFTAGYQISASIGVFAAGMLSAIA
WQYLFLIPSVAILFLPLLLKNLPDRQGNGEKVDWLGFTIIGFAVAFLTLFFSYNAMWMLA
LAVVLFVAFAVYINKASHPFVTPEFFRNTRWVAAIMLILVFYFTNYCVSPMFNAIGANVY
GMTTSQVSMHIVFAFLVAAAFGICSGAIVGRIGVRPSLALAGVLMAVGFIGAGFAVNAGF
VVLTLFACVFYAGCGLMYSPVVSAVLGTLSQDESGRGVGMNDLVMNVTGSIGIAIFGGLM
SSQAFSGSSIIGATGAAASYSNLLLIAGCVPLVGVIYYLVVRRKISE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaccaccgcaaccgtgatcgccgacccctgggcggatccgaaaaccagcaac
tcgatggccatcaaggccctgatcccgctgctcatcacctttatcctcggtacgctgtgc
ctgcagggtttcaatcttgtcttcacgcaggtcggcgaggatgtgggcgccgcagcccag
gcctcgctgatcaccgccatcccgagcatcgtgctcggcatcgtctgctttatctacggc
tcgctcggcgacttcgtctccctgaagaaactcgtcgtggtcggcctcatcactctgttc
gtcggctcggtcttcggctttgtggcaaacttcttcttcgccgcgaacctctggaccgtc
atcatcgcccgcgtgctgcagaccgcaggtgagcaggtcgccggctcggcgttcctggtc
gtggccagcaaatacctgaagccctcgctcaaggttgtgttcttcggtctgttcaccgcc
ggctaccagatctccgcttccatcggcgtgttcgcggccggtatgctgagcgccatcgcc
tggcagtacctgttcctcattccgtccgtcgccatccttttcctgccgctgctgctcaag
aacctgccggacagacagggcaacggtgagaaggtcgattggctgggcttcaccatcatc
ggcttcgccgtcgccttcctcacgctgttcttctcctacaacgccatgtggatgctcgcg
ctcgccgtcgtgctgttcgtggctttcgccgtgtacatcaacaaggcgtcccacccgttc
gtcacccccgagttcttccgcaacacccgctgggttgccgcgatcatgctcattctggtg
ttctacttcaccaactactgcgtctcgccgatgttcaacgccatcggcgcgaacgtgtac
ggcatgactacctcgcaggtctccatgcatatcgtgttcgccttcctggtggccgccgcg
ttcggcatctgctcgggggcgatcgtcggcaggatcggcgtacggccctcgctggccctc
gccggcgtattgatggccgttggttttatcggcgcaggcttcgccgtgaacgcgggattc
gtggtgctgacgctgttcgcttgcgtgttctatgcggggtgcggcctcatgtattcgccg
gtcgtctccgccgtgctcggtaccttgtctcaggacgagtccggccgtggagtgggtatg
aacgacctggtcatgaacgttaccggatccatcggcatcgctatctttggcggcctgatg
agttcgcaggcgttctccggatcgagcatcatcggtgccaccggagccgcggcgagctac
tccaacctgctgcttatcgccggttgcgtgccgcttgtcggtgtgatctactacctggtc
gttcgcaggaagatcagcgagtga
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