Burkholderia semiarida: R0290_02620
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Entry
R0290_02620 CDS
T10421
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
bser Burkholderia semiarida
Pathway
bser00300
Lysine biosynthesis
bser00550
Peptidoglycan biosynthesis
bser01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bser00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
R0290_02620
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
R0290_02620
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bser01011
]
R0290_02620
Enzymes [BR:
bser01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
R0290_02620
Peptidoglycan biosynthesis and degradation proteins [BR:
bser01011
]
Precursor biosynthesis
Amino acid ligase
R0290_02620
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Glyco_hydro_125
Motif
Other DBs
NCBI-ProteinID:
XCV60669
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Position
1:574291..575829
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AA seq
512 aa
AA seq
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MSAARSSHPAHQQIAAALAWLRQHVAPAAQLHADTRSLEAGDVFVAYAVDGADNRAFMAD
AVARGAAAVLYQPEGLVDAPAVPVALAVPALDQLAGEIASGWYGDPSDSLLAIGVTGTNG
KTSCTQWIATALTALREPCAVIGTLGTGMPGQLVPTGFTTPDAPQLQRSLAQLRDAGAQA
VAMEVSSHALHQGRVNGTAFDIAVFTNLTQDHLDYHGTFDAYEAAKAKLFAWRGLRAAVI
NRDDAAGRRLLEKLAGRVRTIAYGIGDAPAPDADRALVALDVRATATGTAFRLRSSWGDA
DVEVGTLGTFNVSNLLAVLGSLLAADVPFDAALAEIERLESVNGRMQRLGGRLQNDEPLV
VIDYAHTPDALEKTLDALRPIAAARGGRLICMFGCGGDRDATKRPLMGAIVERLADEAVV
TSDNPRSEDPQRIIDQVVAGMTAPDRARRIEDRASAILQAVRGAAREDVVVLAGKGHEAT
QEIMGKKRAFSDQDHARLALAARATHGKGGAE
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgcccgcagttcccatccggcgcatcagcagatcgcagccgcgctcgcgtgg
ctgcgtcagcatgtggcccccgcggcgcaactgcatgccgacacgcgcagcctcgaggct
ggcgacgtgttcgtcgcgtatgcggtcgacggggcagataaccgcgctttcatggccgac
gccgtcgcacgcggcgcggccgccgtgctgtatcagccggaagggctggtcgacgcgccg
gccgtacccgtcgcgctcgcggtgccggcgctcgatcaactcgccggcgagatcgccagc
ggctggtacggcgatccgagcgacagcctgctcgcgatcggtgtcacgggcacgaacggc
aagacgtcgtgcacgcaatggatcgccaccgcactgacggcgctgcgcgagccgtgcgcg
gtgatcggcacgctcggcaccgggatgcccggccagctcgtgccgacgggcttcacgacg
cccgacgcgccgcagctgcagcgcagcctcgcgcaattgcgcgacgcgggcgcgcaggcc
gtggcgatggaagtatcgtcgcacgcgctgcaccaggggcgcgtgaacggaacggcgttc
gacatcgcggtgtttacgaacctcacgcaggatcacctcgactatcacggcacgttcgat
gcgtacgaggccgcgaaggcgaagctgttcgcatggcgcggcctgcgcgcggcggtgatc
aaccgcgacgacgcggcaggccgccgcctgctcgagaaactggccggccgcgtgcgcacg
atcgcgtacggaatcggcgacgcaccggcgcccgacgccgatcgcgcgctggtcgcgctc
gacgtgcgcgccaccgcgacgggtaccgcattccgcctgcgttcgtcgtggggcgacgcg
gacgtcgaggtcggtacgctcggcacgttcaacgtcagtaacctgctcgccgtgctgggt
tcgctgctcgcggccgacgtgccgttcgacgcggcactcgccgagatcgagcggctcgag
tcggtcaacggccggatgcagcggcttggcggccggctgcagaacgacgaaccgctcgtc
gtgatcgactacgcacacacgcccgatgcgctcgaaaagacgctcgatgcgctgcgcccg
atcgccgcggcgcgcggtggccggctgatctgcatgttcggctgcggcggcgatcgcgat
gcgacgaagcgcccgctgatgggcgcgatcgtggagcggcttgccgacgaagcagtcgtc
acgagcgacaacccgcgcagcgaagatccgcagcgcatcatcgatcaggtcgtcgcgggc
atgaccgcacccgatcgcgcacgccgtatcgaggatcgcgcgagcgcgatcctgcaggcc
gtgcgcggcgccgcacgcgaggacgtcgtcgtgctggccggcaagggccacgaggccacg
caggaaatcatgggcaagaagcgcgcattctccgaccaggatcacgcgcggctcgcgctc
gcggcgcgcgcgacgcacggcaagggaggcgccgaatga
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