Burkholderia semiarida: R0290_08070
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Entry
R0290_08070 CDS
T10421
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18095
multidrug efflux pump
Organism
bser Burkholderia semiarida
Pathway
bser01501
beta-Lactam resistance
bser02020
Two-component system
Module
bser_M00643
Multidrug resistance, efflux pump MexXY-OprM
Brite
KEGG Orthology (KO) [BR:
bser00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
R0290_08070
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
R0290_08070
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bser02000
]
R0290_08070
01504 Antimicrobial resistance genes [BR:
bser01504
]
R0290_08070
Transporters [BR:
bser02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
R0290_08070
Antimicrobial resistance genes [BR:
bser01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
R0290_08070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
XCV61683
LinkDB
All DBs
Position
1:1742345..1745485
Genome browser
AA seq
1046 aa
AA seq
DB search
MARFFIDRPVFAWVIAIFIMLGGLFAIRALPVAQYPDIAPPVVSIYATYPGASAQVVEES
VTALIEREMNGAPGLLYTSATSSAGAASLYLTFKQGVNADLAAVEVQNRLKTVDARLPEP
VRRDGIQVEKAADNIQLVVSLTSDDGRMTDVQLGEYASANVVQALRRVEGVGKVQFWGAE
YAMRIWPDPVKLAGHGLTASDIASAVRAHNARVTIGDIGRSAVPDSAPIAATVFADAPLK
TPADFGAIALRARPDGSALFLRDVARIEFGGNDYNYPSYVNGKVATGMGIKLAPGSNAVS
TEKRVRATMDELSKYFPPGVKYQIPYETSSFVRVSMNKVVTTLIEAGVLVFLVMFLFMQN
LRATLIPTLVVPVALAGTFGVMYAAGFSINVLTMFGMVLAIGILVDDAIVVVENVERLMV
EEGLGPYDATVKAMRQISGAIVGITVVLTSVFVPMAFFGGAVGNIYRQFALSLAVSIGFS
AFLALSLTPALCATLLKPVSGDHHEKRGFFGGFNRFVARATQRYAARVGAMLKKPVRWLV
VYGALTAAAALMLTQLPTAFLPDEDQGNFMVMVIRPQGTPLAETMQSVREVESAIRRDEP
AAYTYALGGFNLYGEGPNGGMIFVTLKNWKARKAARDHVQAIVARINERFAGTPNTTVFA
MNSPALPDLGSSSGFDFRLQNRGGLDYATFSAAREQLLAAGGKDRALTDLMFAGTQDAPQ
LKLDIDRAKASALGVSMDEINTTLAVMFGSDYIGDFMHGTQVRRVMVQADGRHRLDPDDV
KKLRVRNARGEMVPLAAFTTLHWTLGPPQLTRYNGYPSFTINGSAAAGHSSGEAMSAIER
IAAKLPTGIGYAWSGQSFEERLSGAQAPMLFALSVLVVFLALAALYESWSIPFAVMLVVP
LGVIGAVLGVTLRAMPNDIYFKVGLIATIGLSAKNAILIVEVAKDLVAQRMSLVDAALEA
ARLRLRPIVMTSLAFGVGVLPLAFASGAASGAQTAIGTGVLGGVITATVLAVFLVPLFFV
IVGRLFDVGPRRRGGAQPTTMEGSQP
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtttcttcatcgatcgccccgtcttcgcgtgggtgatcgccatcttcatcatg
ctgggcggcctgttcgcgatccgcgcgctgcccgtggcgcagtacccggacatcgcgccg
cccgtcgtcagcatttatgcgacgtacccgggcgcgtccgcgcaggtcgtcgaggaatcg
gtgaccgcgctgatcgagcgcgagatgaacggcgcgccggggctgctgtatacgtccgcg
acgagcagcgccggggcggcgtcgctgtacctgacgttcaagcagggcgtgaacgccgat
ctcgcggccgtggaagtgcagaaccggctgaagacggtcgatgcgcgcctgcccgagccc
gtgcgccgcgacggcatccaggtcgagaaggccgccgacaacatccagctcgtcgtgtcg
ctgacgtccgacgacggccggatgaccgacgtgcagctcggcgagtatgcgtcggcgaac
gtcgtgcaggcgctgcgccgcgtcgagggtgtcggcaaggtgcagttctggggcgccgaa
tatgcgatgcggatctggcccgacccggtgaagctggccgggcacggcctcaccgcgtcg
gacatcgcgtcggccgtgcgcgcgcacaacgcgcgcgtgacgatcggcgacatcggccgc
agcgcggtgccggacagcgcgccgatcgcggcgaccgtgttcgcggacgcgccgctgaag
acgccggccgatttcggcgcgatcgcgctgcgcgcgcggccggacggctccgcgctgttc
ctgcgcgacgtcgcgcgcatcgaattcggcggcaacgactacaactatccgtcgtacgtg
aacggcaaggtcgcgaccgggatgggcatcaagctcgcgccgggctcgaacgcggtgtcc
accgagaagcgcgtgcgcgcgacgatggacgagctgtcgaagtactttccgccgggcgtg
aaataccagatcccgtacgagacgtcgtcgttcgtgcgcgtgtcgatgaacaaggtcgtc
acgacgctgatcgaggccggcgtgctggtgttcctggtgatgttcctgttcatgcagaac
ctgcgcgcgacactgattccgacgctcgtcgtgccggtcgcgctcgcgggcacgttcggc
gtgatgtacgcggccggcttctcgatcaacgtgctgacgatgttcgggatggtgctcgcg
atcggcatcctcgtcgacgacgcgatcgtcgtcgtcgagaacgtcgagcggctgatggtc
gaggaagggctcgggccgtacgacgcgaccgtcaaggcgatgcggcagatcagcggcgcg
atcgtcgggattaccgtggtgctgacgtcggtgttcgtgccgatggcgttcttcggcggc
gcggtgggcaacatctatcggcagttcgcgctgtcgctcgcggtgtcgatcggcttctcg
gccttcctcgcgctgtcgctgacgcccgcgctgtgcgcgacgctgctcaagccggtgtcc
ggcgaccatcacgagaagcgcggcttcttcggcgggttcaaccgcttcgtcgcgcgggcg
acgcagcgctacgcggcgcgggtcggcgcgatgctgaagaagccggtacgctggctcgtc
gtgtacggcgcgctgaccgcggccgccgcgctgatgctcacgcaactgccgaccgcgttc
ctgccggacgaggatcagggcaacttcatggtgatggtgatccgcccgcaaggcacgccg
ctcgcggaaacgatgcagagcgtgcgcgaagtcgagtcggccatccgccgcgacgagccg
gccgcctatacctatgcgctcggcggcttcaacctctacggcgaagggccgaacggcggg
atgatcttcgtcacgctgaagaactggaaggcgcgcaaggccgcgcgcgatcacgtgcaa
gcgatcgtcgcgcgcatcaacgaacgcttcgcgggcacgccgaacacgacggtgttcgcg
atgaactcgccggcgctgcccgatctcggttcgtcgagcggcttcgacttccggctgcag
aaccgcggcgggctcgactacgcgacgttcagcgccgcgcgcgagcaactgctcgcggcg
ggcggcaaggatcgtgcgctcaccgatctgatgttcgcgggcacgcaggacgcgccgcaa
ctgaagctcgacatcgatcgcgcgaaggcgtccgcgctcggcgtgtcgatggacgagatc
aacacgacgctcgcggtgatgttcggctccgactatatcggcgatttcatgcacggcacg
caggtgcggcgcgtgatggtgcaggccgacgggcggcaccggctcgatccggacgacgtg
aagaagctgcgcgtgcgcaatgcgcgcggcgagatggtgccgctcgcggcgttcacgacg
ctgcactggacgctcgggccgccgcagctcacgcgctacaacggttacccgtcgttcacg
atcaacggctcggccgcggccggccacagcagcggcgaggcgatgagcgcgatcgagcgg
atcgccgcgaaactgccgaccggcatcggctatgcgtggtcgggacagtcgttcgaggag
cggctgtcgggcgcgcaggcgccgatgctgttcgcgctgtcggtgctggtcgtgttcctc
gcgctcgcggcgctctacgagagctggtcgattccgttcgcggtgatgctggtcgtgccg
ctcggcgtgatcggcgcggtgctcggcgtcacgctgcgcgcgatgccgaacgacatctat
ttcaaggtggggctgatcgcgacgatcgggctgtccgcgaagaacgcgatcctgatcgtc
gaagtcgcgaaggatctcgtcgcgcagcgcatgtcgctcgtcgacgcggcgctcgaggcc
gcgcgcctgcggctgcggccgatcgtgatgacgtcgctcgcgttcggcgtcggcgtgctg
ccgctcgcgttcgcatcaggcgccgcgtccggcgcgcagacggcgatcggcaccggcgtg
ctcggcggcgtgatcacggcgaccgtgctcgcggtgtttctcgtcccgctgtttttcgtg
atcgtcggccgcctgttcgacgtcggcccgcgccggcgcggcggcgcgcagccgacgacg
atggagggttcgcaaccatga
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