Burkholderia semiarida: R0290_29200
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Entry
R0290_29200 CDS
T10421
Symbol
mdeB
Name
(GenBank) alpha-ketoglutarate dehydrogenase
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
bser Burkholderia semiarida
Pathway
bser00010
Glycolysis / Gluconeogenesis
bser00020
Citrate cycle (TCA cycle)
bser00620
Pyruvate metabolism
bser00785
Lipoic acid metabolism
bser01100
Metabolic pathways
bser01110
Biosynthesis of secondary metabolites
bser01120
Microbial metabolism in diverse environments
bser01200
Carbon metabolism
bser01210
2-Oxocarboxylic acid metabolism
Module
bser_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
bser00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
R0290_29200 (mdeB)
00020 Citrate cycle (TCA cycle)
R0290_29200 (mdeB)
00620 Pyruvate metabolism
R0290_29200 (mdeB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
R0290_29200 (mdeB)
Enzymes [BR:
bser01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
R0290_29200 (mdeB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDH_E1_M
Transketolase_C_1
PDH_E1_N
Transketolase_N
Motif
Other DBs
NCBI-ProteinID:
XCV64749
LinkDB
All DBs
Position
3:complement(115504..118191)
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AA seq
895 aa
AA seq
DB search
MDMQNRLPTTTTDPDPEELREWCDALDGVLHAWGGDQGKERARHLLDSLLAHAHARRVAW
RPPLITPYVNTVAPDEQPAYPGDLQIERRIAALIRWNALAMVVRANRAQGELGGHIASYA
SAADLFEVGFQHFFRGPDAVHGGDLVFFQAHSAPGVYARAFLEGRLSEESLSHYRQEIVA
EAGGIRGLSSYPHPFLMPDFWQFPTGSMGLGPLNAIYQARFMRYMENRGLKAHGDRRVWG
FFGDGEMDEPESIAALTLAARERLDNCIFVINCNLQRLDGPVRGNGRVIDELEALFAGAG
WNIVKCIWGSEWDALLGRDHGGVLERAFANTVDGDFQTLSANDGAFNRETFFSRTPELRA
LVDSLSDDDIAMLRRGGHDPVKIHAAFAAATIRNGRPSVVLAKTMKGYGMGTIAQGRMTT
HQQKKLERDDLLAFRDRFALPLSDEEASQARFYRPAHDSDELRYLRKRRETLGGYLPQRR
VASERLAVPELASVAGFSLNADGKVMSSTTAFVRQLGALLKDASLGPRLVPIVADEARTF
GMANLFRQVGIYAPFGQLYDPEDNSSMLSYREASDGQILEEGITEAGAISSWTAAATSYA
VHGIPMMPFYIYYSMFGFQRIGDLIWAAADQRARGFLVGATSGRTTLGGEGLQHQDGSSH
LLASTIPTCRAYDPSFAGELAVLVDYGLRRMLSDAHDEFFYVTVTNENVAQPSIADVSHE
GIVKGMYLFRRGGRFQRRVQLFGSGAIMGEVLKAADEFERLHEVSADVWSITSYVELGRD
GARCEREWRLGSGDIGESWIATQLRATVGPIVAASDYVKALPEMVRAYIPEGRRYVTLGT
DGFGRSDSRAQLRRYFEVDAQAIVQAGLKALEGPVVGNEARQLSGASDVVGVVAY
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggacatgcagaatcgacttccgaccacgacgaccgatcccgacccggaggagctccgg
gaatggtgcgacgcgctcgatggcgtgttgcatgcgtggggcggcgatcaaggcaaggaa
cgtgcacgccatcttctcgactcgttgttggcgcatgcacacgcccgtcgcgtcgcgtgg
aggccgcctctgatcacgccgtacgtcaataccgtggcgcccgacgagcagcctgcctat
ccgggcgatctgcaaatcgagcggcggatcgcggcgttgatacggtggaacgcgctcgcg
atggtggtccgcgccaaccgggcgcagggcgaactgggcggacacatcgcgagctatgct
tcggccgcggacctgttcgaggtcggtttccagcattttttccgcggcccggatgcggtg
cacggcggcgatctggtgtttttccaggcgcactcggcgccgggtgtctacgcgcgggca
tttctcgaggggcgactgtcggaagaatcgctgtcccattatcgccaggagatcgtggcg
gaggccggcggcatccggggattgagttcatatcctcatccctttctgatgccggacttc
tggcagtttccaaccggatcgatgggactggggccgctcaacgccatttatcaggcgcgg
ttcatgcggtacatggaaaatcgtggcttgaaggcgcatggcgatcgtcgcgtgtggggt
tttttcggcgatggagaaatggacgagcccgagtcgatcgccgcgttgacactcgcggct
cgcgagcggctcgacaactgcatattcgtcatcaactgcaatctccagcgactggatggc
cccgttcgcggcaacggccgggtcatcgacgaactcgaggcattgttcgccggcgccgga
tggaacatcgtcaaatgcatctggggctccgagtgggatgcgttgctcggccgcgatcat
ggcggtgtgctcgaacgcgctttcgcgaacaccgtcgatggtgatttccagacgttgtcg
gccaatgacggcgcgttcaatcgcgagacgttcttcagccggacgccggaactgcgagcg
ctggtggattcgttgtccgacgacgacatcgcgatgcttcggcgcggcggacacgatccc
gtgaaaatccatgccgcctttgccgcggcgacgatcaggaatggtcggccgtcggttgtg
ctggccaagaccatgaagggctatggcatgggcacgatcgcgcaagggcgcatgacgacg
catcagcagaagaagctggagcgggacgacctgcttgcctttcgggatcgattcgcgctc
ccgctttccgacgaagaggcatcgcaagcgcggttctatcggccggcgcacgatagcgat
gagctgcggtacttgcgcaagcgtcgcgagacgcttggcggctatctccctcagcgacgt
gtggcatccgagcgactggcggtgcccgaactggcgagcgtcgcgggcttctcgctgaat
gcggacggcaaggtcatgagttcgacgaccgccttcgtcaggcaacttggtgcgctgctc
aaggacgccagcctcggcccgcgattggttccgatcgtggcggacgaggccagaacgttc
ggcatggcgaatctttttcgtcaggtcggaatctacgcgccgttcggtcagttgtacgat
ccggaagacaattcatcgatgctctcgtatcgtgaagcgtccgatggtcaaattctcgag
gaaggcatcacggaggcgggggccatctcgtcgtggacggccgccgcgacgagttacgcc
gtgcacggtattccgatgatgccgttctatatctactacagcatgttcggctttcagcgt
atcggcgacttgatctgggcggctgccgatcagcgagcccgaggctttctcgtcggcgcc
acgtcaggccgcacgacgctgggaggtgaaggattgcagcatcaggatggctcgagccat
cttctcgcgtcgacgataccgacgtgtcgggcgtacgatccgtcctttgccggtgaactg
gcggtcctggtcgattacgggttgcggcgcatgctgagtgacgcgcacgacgagttcttt
tacgtcaccgtgaccaatgaaaacgtcgcgcaaccgagtattgccgatgtgtcgcatgaa
ggtatcgtgaagggcatgtatctgtttcgacggggcggccgctttcagaggcgggttcag
ttgttcggcagcggcgcgatcatgggggaggttctcaaggcggcggacgaattcgagcgg
ttgcatgaggtgtccgcggacgtctggagtattaccagctatgtcgagctggggcgggat
ggcgcgcgatgcgagcgggaatggcggctcggttccggagacatcggggaatcgtggatt
gccacccagctgcgcgcgaccgttgggccgatcgtcgccgcgtcggactatgtgaaagcg
cttccggaaatggttcgtgcatatattcctgaaggacggcgatatgtcacgcttgggacc
gacgggttcggtcgaagcgattcgcgcgcgcagttgcggcggtattttgaggtggatgct
caggccatcgtgcaggccgggttgaaggccctcgaggggccggtggtggggaatgaggcc
cgccaactgtcgggggcgtctgatgtcgtcggggtggtggcgtactaa
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