Brucella canis HSK A52141: BCA52141_I2911
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Entry
BCA52141_I2911 CDS
T01705
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bsk
Brucella canis HSK A52141
Pathway
bsk03030
DNA replication
bsk03410
Base excision repair
bsk03420
Nucleotide excision repair
bsk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BCA52141_I2911
03410 Base excision repair
BCA52141_I2911
03420 Nucleotide excision repair
BCA52141_I2911
03430 Mismatch repair
BCA52141_I2911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsk03032
]
BCA52141_I2911
03400 DNA repair and recombination proteins [BR:
bsk03400
]
BCA52141_I2911
Enzymes [BR:
bsk01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BCA52141_I2911
DNA replication proteins [BR:
bsk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BCA52141_I2911
DNA repair and recombination proteins [BR:
bsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BCA52141_I2911
NER (nucleotide excision repair)
GGR (global genome repair) factors
BCA52141_I2911
MMR (mismatch excision repair)
DNA ligase
BCA52141_I2911
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BCA52141_I2911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
Motif
Other DBs
NCBI-ProteinID:
AEW14829
LinkDB
All DBs
Position
1:1785561..1787720
Genome browser
AA seq
719 aa
AA seq
DB search
MSDISVEKLTELEAAAELERLARAIAHHDELYHAKDRPEISDAAYDALKRRNEAIEAHFP
ALVRDDSPSRRVGAAPALATFAPVVHARPMLSLDNAFSDEDVRDFVGSVYRFLGQLPDDS
IAFTAEPKIDGLSMSIRYENGILVSGATRGDGTTGENVTANIRTIAEIPNRLPAGAPAVV
EVRGEVYMAKSDFLTLNAQMEAEGKQTYVNPRNTAAGSLRQLDAKVTASRKLRFFAYAWG
EMSDMPADTQLGMVEVFRQWGFPVNPLMKRFNSVDGLLAHYRAIGMERPTLDYDIDGVVY
KVDRLDLQTRLGFRSRSPRWAIAHKFPAEQALTILRGIDIQVGRTGALTPVARLEPITVG
GVVVTNATLHNEDYIKGIGQKGEPIREGRDIRIGDSVIVQRAGDVIPQIVDVVLEEGKKR
GEPYQFPHVCPACGSHAVREEGEAVRRCTGGLICPAQAVERIRHFVSRNAFDIEGLGEKQ
VEFFFNAEDPALCIRSPADIFTLKKRQENSLTKLQNIEGFGATSVKKLYDAIDARREIAL
HRFLFGLGIRHVGEVNAKRLARAYLSYAAFEKAALEAVPPKEGDRTDKGSEAWQDMLAVE
GIGSIVAEAVVYFYGEPHNREVLAALLAEVTPLDEEARVATGSPVEGKTVVFTGSLERMS
RDEAKAMAERHGAKTAGSVSKKTDLVVAGPGAGSKLAKATELGIEVINEDDWFKLVGED
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatatttccgtcgagaaactgaccgaactcgaagctgccgccgaactggaacgg
ctggcgcgcgcgattgctcatcacgacgagctttatcacgccaaggacaggccggaaatt
tccgatgcggcttatgatgcactgaagcggcgcaacgaggcgattgaagcgcactttccg
gcacttgtccgcgatgacagcccgtcgcggcgtgtgggtgcagccccggcgcttgccacc
tttgcgcctgttgttcacgcgcggcccatgctgtcgctggataatgcctttagtgatgag
gacgtgcgtgattttgttggcagcgtctatcgctttctgggccaactgccggatgattcc
atcgcctttaccgcagaaccgaagatcgatgggctttccatgtcgatccgttacgagaat
ggaattctggttagcggtgcgacacgcggggatggcacaacgggcgagaatgtaacagcc
aatatccgcaccattgctgaaatcccgaacaggcttccggcaggtgcgcctgctgtcgtg
gaagtgcgcggcgaggtctatatggccaagagcgactttctgacgctcaatgcgcagatg
gaggcggagggcaagcagacctatgtgaacccgcgcaatacggcagcaggttcgctgcgc
cagcttgatgcgaaggtgacggcaagccgcaagctcaggttcttcgcctatgcctggggg
gaaatgtcggacatgcctgcggatacgcaattgggcatggtcgaggtttttcgccaatgg
ggctttccggtcaatccgctgatgaagcggttcaacagcgtggatgggttgcttgcgcat
tatcgcgccatcggcatggagcgtcccacgctcgattacgatatcgacggtgttgtttac
aaggtggaccggctcgacctgcaaacccggcttggttttcgctcgcgcagcccgcgctgg
gcgattgcgcataaattcccggcggaacaggcgctcaccattttgcgcggcatcgatatt
caggtgggccgcactggcgcgctgacgccggtggcgcggctggagccaatcaccgtcggc
ggtgtggttgtgaccaacgcgacgctgcacaatgaggactatatcaagggcataggtcag
aagggcgagccgatccgggaggggcgcgatatccgcattggcgatagcgtgatcgtgcag
cgcgcgggcgatgtcatcccgcagatcgtggatgtggtgcttgaggaaggcaaaaaacgc
ggcgagccttatcagtttccccatgtctgccccgcctgcggcagccatgccgtgcgcgag
gagggcgaggcggtacgccgctgcaccggcgggctgatctgccctgcgcaggcggtggaa
cgcatccgccattttgtgtcgcgcaatgccttcgacattgaggggcttggcgaaaagcag
gtcgagttcttcttcaatgcggaagatccggccctttgcatccgctcgcctgccgatatt
ttcacactgaaaaagcggcaggaaaactcgctgaccaagcttcagaatatcgaaggcttt
ggcgcaacttccgtgaagaagctttatgacgccatcgatgcgcggcgcgagattgcactc
caccgctttctgtttggtcttggcatccgccatgtgggcgaggtgaatgccaagcgcctt
gcccgcgcctatctttcatatgccgcttttgagaaggcggcgctggaggctgtgccgcca
aaagaaggcgaccgcaccgacaagggcagcgaagcgtggcaggacatgctggccgtggag
gggatcggttccatcgtggcggaagccgtggtctatttttatggcgagccgcataaccgc
gaagtgctggccgcacttcttgccgaagtaacgccgcttgatgaggaagcgcgtgtggcg
accggttcgcccgtcgagggcaagacggtggttttcaccggcagtctggagcgcatgtca
cgcgatgaagcgaaggctatggctgagcgccatggcgcgaagacggcaggctctgtctcc
aagaagaccgatctcgtggtggcagggccgggggccggttccaagcttgccaaggcgacg
gaactgggcattgaggttatcaatgaagacgactggttcaagcttgttggggaggattga
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