Bacillus subtilis subsp. natto BEST195: BSNT_08173
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Entry
BSNT_08173 CDS
T02607
Symbol
polC
Name
(GenBank) DNA polymerase III PolC
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
bso
Bacillus subtilis subsp. natto BEST195
Pathway
bso03030
DNA replication
bso03430
Mismatch repair
bso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSNT_08173 (polC)
03430 Mismatch repair
BSNT_08173 (polC)
03440 Homologous recombination
BSNT_08173 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bso03032
]
BSNT_08173 (polC)
03400 DNA repair and recombination proteins [BR:
bso03400
]
BSNT_08173 (polC)
Enzymes [BR:
bso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BSNT_08173 (polC)
DNA replication proteins [BR:
bso03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BSNT_08173 (polC)
DNA repair and recombination proteins [BR:
bso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BSNT_08173 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_a_NII
DNA_pol3_finger
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
RNase_H_2
DEDDh_C
Zn-ribbon_8
DZR
Motif
Other DBs
NCBI-ProteinID:
BAI85288
UniProt:
D4FWQ7
LinkDB
All DBs
Position
1737701..1742044
Genome browser
AA seq
1447 aa
AA seq
DB search
MMFLGRDTVLMEQLSVNRRQFQILLQQINMTDDTFMTYFEHGEIKKLTIHKASKSWHFHF
QFKSLLPFQIYDTLTTRLTQSFAHIAKVTSSIEVQDAEVSESIVQDYWSRCIEELQGISP
PIISLLNQQKPKLKGNKLIVKTKTDTEAAALKNKYSSMIQAGYRQFGFPDLQLDAEIFVS
EQEVQKFREQKLAEDQERAMQALIEMEKKDKESDEDQAPSGPLVIGYQIKDNEEIRTLDS
IMDEERRITVQGYVFDVETRELKSGRTLCIFKITDYTNSILIKMFAREKEDAALMKSLKK
GMWVKARGSIQNDTFVRDLVMIANDVNEIKAKTREDSAPEGEKRVELHLHSPMSQMDAVT
GIGKLVEQAKKWGHEAIALTDHAVVQSFPDAYSAAKKHGIKMIYGMEANLVDDGVPIAYN
AAHRLLEEETYVVFDVETTGLSAVYDTIIELAAVKVKGGEIIDKFEAFANPHRPLSATII
ELTGITDDMLQDAPDVVDVIRDFREWIGDDILVAHNASFDMGFLNVAYKKLLEVDKAKNP
VIDTLELGRFLYPEFKNHRLNTLCKKFDIELTQHHRAIYDTEATAYLLLKMLKDAAEKGI
QYHDELNENMGQSNAYQRSRPYHATLLAVNSTGLKNLFKLVSLSHIHYFYRVPRIPRSQL
EKYREGLLIGSACDRGEVFEGMMQKSPEEVEDIASFYDYLEVQPPEVYRHLLELELVRDE
KALKEIIANITKLGEKLNKPVVATGNVHYLNDEDKIYRKILISSQGGANPLNRHELPKVH
FRTTDEMLEAFSFLGEEKAKEIVVTNTQKVASLVDDIKPIKDDLYTPKIEGADEEIREMS
YQRARSIYGEELPEIVEARIEKELKSIIGHGFAVIYLISHKLVKRSLDDGYLVGSRGSVG
SSLVATLTEITEVNPLPPHYVCPECQHSEFFNDGSVGSGFDLPDKTCPHCGTPLKKEGHD
IPFETFLGFKGDKVPDIDLNFSGEYQPQAHNYTKVLFGEDNVYRAGTIGTVAEKTAYGYV
KGYAGDNNLHMRGAEIDRLVQGCTGVKRTTGQHPGGIIVVPDYMDIYDFSPIQFPADATG
SEWKTTHFDFHSIHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFQGTE
SLGVTEEQIGCKTGTLGIPEFGTRFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQE
LIHNNICELSEVIGCRDDIMVYLIYQGLEPSLAFKIMEFVRKGKGLTPEWEEEMKNNNVP
DWYIDSCKKIKYMFPKAHAAAYVLMAVRIAYFKVHHALLYYAAYFTVRADDFDIDTMIKG
STAIRAVMEDINAKGLDASPKEKNLLTVLELALEMCERGYSFQKVDLYRSSATEFIIDGN
SLIPPFNSIPGLGTNAALNIVKAREEGEFLSKEDLQKRGKVSKTILEYLDRHGCLESLPD
QNQLSLF
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttttagggagggatactgtcttaatggaacagttatcagtaaacagaaggcag
tttcaaattcttctgcagcagattaatatgacagatgataccttcatgacatactttgaa
catggcgagattaaaaagctgacaattcacaaagcttctaagtcttggcattttcatttt
caatttaaatctttgctgccttttcaaatatatgacacattaacaacgaggctgacgcaa
tcgtttgcccacatagcaaaagtgacatcttcaattgaagttcaggatgccgaggtcagt
gaaagtatcgttcaagactactggtcacgctgcattgaagaactgcagggcatttcgccg
ccgattatcagtcttttaaaccagcaaaaaccgaagctgaagggcaataaactgattgtc
aaaaccaaaacggatacagaagcggctgcgctaaaaaacaaatacagttccatgattcaa
gcaggctaccgtcaatttggctttccggatcttcagcttgatgctgaaatatttgtatcc
gagcaggaagttcaaaagtttcgggagcaaaagcttgcggaagaccaagagcgggctatg
caggccttgattgaaatggagaagaaagataaagaaagtgatgaagaccaagcaccatct
ggtcctcttgttatcggttatcaaattaaagataacgaggaaatccggacacttgacagc
atcatggacgaagaacggagaattacggtccaaggttatgtgtttgatgtggagacgcgc
gagctgaagagcgggcgcacgctgtgtatcttcaaaattacagactatacaaatagtatt
ttgatcaaaatgtttgcacgtgaaaaagaagatgcggcactgatgaagtctctgaaaaaa
ggaatgtgggtaaaagcacgcggaagcattcaaaatgatacatttgtcagagaccttgtc
atgatcgcaaatgacgtaaacgaaataaaagcaaaaacccgtgaagattcagcacctgaa
ggagaaaaaagagtggaattgcatcttcattccccaatgagccaaatggatgctgttacg
ggtatcggaaagcttgtcgaacaggcgaaaaaatgggggcatgaggccatcgctttaacc
gaccatgctgtcgttcaatccttccctgatgcgtattctgcggccaaaaagcatggaatt
aaaatgatttacgggatggaagcgaatctcgtggatgatggcgtgccaattgcttataat
gccgcacatcgtctgctcgaagaagaaacatatgttgtttttgacgttgagacgacagga
ttgtctgctgtatacgataccattattgagctggctgcagtaaaagtaaaaggcggagaa
attattgataaatttgaggcgtttgcgaacccgcatcgtccactttcagccacaatcata
gagctgacagggatcactgatgatatgctacaagacgctccggatgtcgtagatgtaata
agagatttcagagaatggattggcgatgatatccttgtcgctcataatgcaagctttgat
atgggattcttaaatgtagcctataaaaagcttcttgaagtcgataaagctaaaaaccca
gtcattgacacgctagaactaggacgttttctctatcctgaatttaagaaccaccggttg
aacacactttgtaaaaagtttgatatcgaactcacacagcatcaccgtgcgatctatgat
actgaggcaaccgcttatttgcttctgaaaatgctgaaagacgcagctgaaaaaggtatt
cagtaccatgatgagttgaatgaaaatatgggtcagtccaatgcttatcaaagatcaaga
ccgtatcatgcaacattacttgccgtgaacagcacgggacttaaaaatttatttaagctt
gtgtcactttctcatattcattatttttacagagtgccgcgtattccgagatctcagctt
gagaaatacagggaagggctgctgatcggttctgcctgtgacaggggagaggtttttgag
ggaatgatgcaaaaatcgcctgaagaggtggaagatatcgcgtcattctatgattacctt
gaggttcagccgcctgaagtgtatcgtcacttgctggagcttgaactggtccgtgatgaa
aaagcgctgaaagaaattattgcgaatatcacgaagctgggggaaaagcttaataaaccg
gttgttgctacgggaaatgttcattacttgaatgatgaggataaaatctacagaaagatt
ttaatatcctcacaaggcggggcaaatccgctgaataggcatgaactgccgaaagtgcat
ttcagaacgacagacgaaatgcttgaagctttttctttcttaggtgaagaaaaagcgaag
gagatcgtagtcaccaatacccaaaaggttgcttctttagttgatgacatcaagccgatt
aaagatgatttatatacgccgaaaatcgaaggcgccgatgaagagatcagagaaatgagc
tatcagcgtgcaagaagtatttacggggaagagctgcctgaaattgtcgaagcgcgtatt
gaaaaagagttaaagagtattattggccacggatttgctgttatttacttgatctctcac
aaacttgtaaaacgttcactagatgacgggtatctcgttggttcccgtggttccgtagga
tcttcattagttgcgacacttactgagattactgaggtaaacccgctgccgccgcactat
gtttgtcctgagtgtcagcattctgagttctttaatgacggttctgtcggttctggtttt
gacctgcctgacaagacatgtcctcattgcggaacgcctttgaaaaaagagggccatgat
attccatttgaaacgttcttaggatttaaaggggacaaagtacctgatatcgatttgaac
ttctcaggggaatatcagccgcaagcacacaattacacaaaagtattgttcggggaagac
aatgtatatcgtgcgggaacaataggcacggtggcagaaaaaacagcctacggttatgta
aaaggctatgccggagacaacaatcttcatatgcgcggtgccgaaatagatcggctcgta
cagggatgcacaggtgtaaaacgtacaactggacaacaccctggcggtattatcgtagtt
ccggattatatggatatttatgatttttcaccgatccagtttccggcagatgccacaggt
tcagagtggaaaacgactcattttgatttccactccatccatgacaacctgttaaaactt
gatattctcggacacgatgacccgactgttattcggatgcttcaagacttaagcggaata
gatccgaaaacaattccgacggatgatcctgaagtgatgaagatcttccagggaaccgaa
tcactcggtgtgactgaagaacagattggctgtaaaacgggcactcttggaattcctgaa
ttcggaacccgatttgtccggcagatgcttgaagatacaaagccgaccactttttctgag
ctcgttcaaatttcaggcttgtctcacggaactgatgtatggcttggcaatgcacaggag
ctcatccacaataatatttgtgagctgagtgaggttatcggctgccgtgatgacattatg
gtttatttaatctatcaaggccttgagccgtcccttgcctttaaaatcatggaattcgtg
cgtaaaggaaaaggattaacgcctgaatgggaagaagaaatgaaaaataacaatgtccca
gactggtatattgattcctgtaaaaagattaaatacatgttcccgaaagcccacgccgcg
gcatatgtcttaatggcagtccgcattgcttactttaaagtgcatcatgctcttttgtat
tatgcggcttattttaccgttcgtgcagatgactttgatatcgatacaatgatcaagggc
tctacagcaatcagagcggtaatggaggatataaacgctaaaggccttgatgcttcaccg
aaggaaaagaaccttctgactgttttagaattagcgcttgagatgtgtgagagaggctat
tcatttcaaaaagtcgatttatatcgctccagcgctacagagtttattattgacggcaac
agtcttattccaccgtttaactctattccaggattagggacgaacgctgctttgaacatt
gtaaaagctcgcgaagaaggcgagttcctctcaaaagaagatttgcaaaagagagggaaa
gtatcaaaaacgattttagagtacttagatcgccatggctgtctggagtcactgcctgat
caaaaccaattgtcactgttctaa
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