Bacillus subtilis subsp. natto BEST195: BSNT_08215
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Entry
BSNT_08215 CDS
T02607
Symbol
ymcB
Name
(GenBank) hypothetical protein
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
bso
Bacillus subtilis subsp. natto BEST195
Brite
KEGG Orthology (KO) [BR:
bso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bso03016
]
BSNT_08215 (ymcB)
Enzymes [BR:
bso01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
BSNT_08215 (ymcB)
Transfer RNA biogenesis [BR:
bso03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
BSNT_08215 (ymcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
BAI85331
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Position
1783410..1784972
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AA seq
520 aa
AA seq
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MEVWFERRKYDMNEKQKLESGQVNPSDKKSEKDYSKYFEAVYIPPSLKDAKKRGKEAVTY
HNDFKISEQFKGLGDGRKFYIRTYGCQMNEHDTEVMAGIFMALGYEATNSVDDANVILLN
TCAIRENAENKVFGELGHLKALKKNNPDLILGVCGCMSQEESVVNRILKKHPFVDMIFGT
HNIHRLPELLSEAYLSKEMVVEVWSKEGDVIENLPKVRNGKIKGWVNIMYGCDKFCTYCI
VPYTRGKERSRRPEDIIQEVRRLASEGYKEITLLGQNVNAYGKDFEDMTYGLGDLMDELR
KIDIPRIRFTTSHPRDFDDRLIEVLAKGGNLLDHIHLPVQSGSSEVLKLMARKYDRERYM
ELVRKIKTAMPNASLTTDIIVGFPNETDEQFEETLSLYREVEFDSAYTFIYSPREGTPAA
KMKDNVPMRVKKERLQRLNALVNEISAKKMKEYEGKVVEVLVEGESKNNPDILAGYTEKS
KLVNFKGPKEAIGKIVRVKIQQAKTWSLDGEMVGEAIEVK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
gtggaagtttggtttgaaaggagaaaatatgacatgaatgaaaaacaaaaattagagagc
ggacaagttaatccatcggacaaaaaatccgagaaggattacagcaagtactttgaagct
gtttacattccgccttctttaaaagacgcgaaaaaacgaggcaaggaagccgttacttat
cataatgactttaaaatttctgaacaatttaaaggattgggagacggaagaaagttctat
atccgtacgtacggctgccaaatgaatgaacacgatacagaggttatggcagggatcttt
atggcgctcggttacgaagcgacaaactctgttgacgatgccaatgtcattttgttaaat
acatgtgcaatccgtgaaaatgctgaaaacaaggtgtttggtgagctcgggcacttaaaa
gcactgaaaaaaaacaatcccgatctaattttaggcgtgtgcggctgtatgtcccaagag
gaatcagtcgtgaaccgtattttgaaaaaacatccgtttgtcgatatgattttcggaacg
cataacattcatcgcctgccggagcttttgtcagaagcatacctttcaaaagaaatggtt
gtagaagtttggtctaaggaaggggacgttattgaaaaccttccgaaagtccgaaatgga
aaaattaagggctgggtcaatatcatgtacggctgtgacaaattctgtacgtattgcatt
gtgccttacacacgcggaaaagaaagaagccgccgccctgaggatatcattcaggaagtg
agaaggcttgcaagtgaaggctataaggaaattacactgttaggccaaaatgtaaacgcg
tatggaaaagactttgaagatatgacttacggacttggtgatttgatggatgaactgaga
aaaatcgatatcccgagaatccgttttacaacgagtcatccgcgcgactttgacgaccgc
ctcattgaagtgcttgcaaaaggcggaaatctgcttgatcacattcatcttccggttcaa
tcaggaagctcagaagttctgaagctgatggcccgcaaatatgacagagagcgttacatg
gagctggtgcgaaaaataaagacagcgatgccaaacgcttctttgacaacggacattatc
gtcggatttccaaatgaaacggacgaacagtttgaagaaacgctttctctataccgtgaa
gtggagtttgacagcgcctatacgttcatttactctccgcgtgagggcactccggctgct
aagatgaaagataatgtaccgatgcgtgtgaaaaaagaacgcctgcagcgtctaaacgca
ctggtgaatgaaatttctgctaaaaaaatgaaggaatacgaaggcaaggttgtcgaagta
ttagttgagggtgaaagcaaaaataaccctgatattcttgccggctatacggaaaaaagc
aagcttgtcaatttcaaagggccgaaggaagccatcggcaaaatcgtccgcgtgaaaatc
cagcaagcgaaaacatggtcgcttgacggagaaatggtaggagaagcaatcgaggtgaaa
taa
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