Bacillus subtilis subsp. natto BEST195: BSNT_08954
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Entry
BSNT_08954 CDS
T02607
Symbol
yqfS
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
bso
Bacillus subtilis subsp. natto BEST195
Pathway
bso03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSNT_08954 (yqfS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bso03400
]
BSNT_08954 (yqfS)
Enzymes [BR:
bso01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
BSNT_08954 (yqfS)
DNA repair and recombination proteins [BR:
bso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BSNT_08954 (yqfS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
OST3_OST6
Motif
Other DBs
NCBI-ProteinID:
BAI86033
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All DBs
Position
complement(2396111..2396977)
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AA seq
288 aa
AA seq
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MSGKHMLLAASQEAVSYGANTFMIYTGAPQNTRRKKIEDLNIEAGRAHMQENGIDEIIVH
APYIINIGNTTNPSTFELGVDFLRSEIERTAAIGAKQIVLHPGAHVGAGAEAGIKKIIEG
LNEVIDPNQNVQIALETMAGKGSECGRSFEELAQIIEGVTHNEQLSVCFDTCHTHDAGYN
IVEDFDGVLNEFDKIIGIDRIKVLHINDSKNVKGARKDRHENIGFGEIGFDALQYVVHHE
QLKDIPKILETPYVGEDKKNKKPPYRFEIEMLKEKQFDDTLLEKILQQ
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaaaacatatgcttctggctgcaagccaggaagcagtctcttatggggcgaat
acgtttatgatctatacaggcgcaccgcaaaatacgcgccgaaagaaaattgaagactta
aatatagaagcaggccgggcacatatgcaagaaaacggcattgacgagattatcgtacac
gcgccttatattattaatattggcaacacgacaaatccgtccacttttgagctgggtgtt
gattttcttcgttcagaaattgaacggacagcggccatcggagcgaagcaaattgtcctt
catcctggtgctcacgtaggggcaggagctgaagccggcatcaaaaaaattattgaaggc
ttaaatgaagtgattgatccgaatcaaaatgtccagattgcattagaaacaatggctgga
aaaggatcggaatgcggcagaagctttgaggagcttgcacagattatcgaaggcgttaca
cacaatgagcagctgtcagtgtgctttgacacgtgccatacacatgatgccgggtataac
attgtcgaagactttgacggagtgctgaacgagttcgataaaatcattggcattgaccgt
attaaagtgcttcatatcaatgacagcaaaaatgtcaaaggtgcgagaaaagaccgccat
gaaaatattggctttggtgaaataggttttgacgcactgcaatatgttgttcaccatgag
cagttaaaagacattccaaaaattcttgaaacaccatacgtcggtgaagataaaaagaac
aaaaaaccgccataccgttttgagattgaaatgctgaaagaaaaacaatttgatgataca
ttgctcgaaaagattttacagcaataa
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