Bacillus subtilis subsp. natto BEST195: BSNT_09861
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Entry
BSNT_09861 CDS
T02607
Symbol
yvgS
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bso
Bacillus subtilis subsp. natto BEST195
Pathway
bso03420
Nucleotide excision repair
bso03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BSNT_09861 (yvgS)
03430 Mismatch repair
BSNT_09861 (yvgS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bso03400
]
BSNT_09861 (yvgS)
Enzymes [BR:
bso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BSNT_09861 (yvgS)
DNA repair and recombination proteins [BR:
bso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BSNT_09861 (yvgS)
MMR (mismatch excision repair)
Other MMR factors
BSNT_09861 (yvgS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
AAA_19
AAA_30
Viral_helicase1
PhoH
SLFN-g3_helicase
AAA_16
DEAD
ResIII
NACHT
NPHP3_N
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BAI86915
LinkDB
All DBs
Position
complement(3224938..3227295)
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AA seq
785 aa
AA seq
DB search
MFVNYFLEVPFMNQQDKEWKEEQSRIDEVLQELEKKERFLETSAGGLKHDIIGLRKSFWE
DVKVNFDDAHEAIETMASIKQQAELLSDREHNHRRMDQQLKRIHQLKKSPYFGRIDFIEN
GEEQAERIYIGLASCLDEKEEHFLIYDWRAPISSLYYNYSPGKAEYEVPGETIEGEMVLK
RQFMIKNGTLKAMFNTDMTIGDEMLQEVLSHHSDTQMKNIVSTIQKEQNQIIRNEKSKIL
IVQGAAGSGKTSAALQRVAYLLYRHRGVIDAGQIVLFSPNFLFNSYVSSVLPELGEENME
QATFQEYIEHRLGRRFKCESPFDQLEYCLTETKGGDFPTRLAGITWKAGLSFQQFINEYV
TRLSSDGMIFKNIIFRGQKLITKEQIQSYFYSLDQNHSIPNRMEQTAKWLLSELNKLEKK
ERRKDWVVHEAELLDKEDYLDVCKKLQERKRFSESTFNDYQREQQLLAAIIVKKAFKPLK
QAVRLLAFLDVTQLYLQLFSGWGGKFQHEKMAAIGELTRSAFTDNKLLYEDAAPFLYMQD
LIEGRKKNTKIKHLFIDEAQDYSPFQMAYMRSIFPAASMTVLGDINQSIYAHTIHGDQRM
DACFEDDPAEYVRLKRTYRSTRQIVEFTKAMLQDGADIEPFNRSGEMPLVVKTEGHESLC
QKLAQEIGRLKKKGHETIAVICKTAQQCIQAHAHMSEYTDVRLIHKENQPFQKGVCVIPV
YLAKGIEFDAVLVYDASEEHYHTEHDRRLLYTACTRAMHMLAVFYTGEASPFVTAVPPHL
YQMAE
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtcaactattttctggaggtgccgttcatgaatcagcaggataaggaatggaag
gaagagcagtcgagaatagatgaggtgctgcaggagctcgaaaaaaaagagcggtttctg
gaaacgtctgcgggcgggttgaagcatgatatcatcggattaagaaaaagcttttgggag
gatgttaaggttaattttgatgatgcccatgaagcgattgaaacgatggcaagcattaag
cagcaggcagagctgctgtctgatcgggaacacaatcatcggcgcatggatcagcagctc
aaacgaattcatcaattaaaaaaatcgccttatttcggccggattgattttattgaaaac
ggcgaggagcaggcagagcgaatttatatcggtttagcttcctgtttggatgagaaggag
gaacactttctgatttatgactggagggcgccgatatcaagtttgtactacaattattcc
ccaggaaaagcggagtacgaggtgcccggtgaaacgatagaaggggaaatggtgctgaaa
cgccagtttatgatcaaaaacggcactctcaaggcgatgtttaataccgatatgacgatt
ggtgatgaaatgctgcaagaggtattaagccatcactccgatacccaaatgaaaaacatc
gtgtctacgattcagaaagaacaaaatcagattatccgtaatgaaaaaagcaagatcctg
atcgtgcagggagcggctggcagcgggaaaacatcggctgcgcttcagcgtgtcgcttat
ttgttatacaggcaccgtggcgtcattgatgccggacaaatcgttttgttttctcccaac
ttcttatttaacagctatgtctcctctgttttgccggagttaggagaagagaatatggag
caggcgacgtttcaggaatatatcgagcatcgtcttggccgcaggttcaaatgtgaaagc
ccctttgatcagctcgaatattgcctgaccgaaacaaagggaggcgattttccaacaagg
cttgcgggaatcacatggaaggcgggtttatcctttcagcaattcattaatgaatacgtc
acacggctttcctctgacgggatgatttttaaaaatattatattccgcggacaaaagctg
atcacaaaggagcaaattcaatcctatttttactcattggatcaaaatcactccattccg
aatcggatggagcaaaccgcgaagtggctgctgagtgagcttaacaagcttgagaaaaag
gaacggcgaaaggattgggtcgttcatgaagctgagctgcttgacaaagaggactacttg
gacgtgtgcaaaaaactgcaagaaaggaaacgattcagcgagagtacgtttaacgattat
caaagagagcagcagctgcttgccgccatcattgtgaaaaaagctttcaaaccgctcaag
caggcggtcaggctccttgcatttcttgatgttacacagctgtatttgcaattgttttct
ggctggggaggaaaatttcagcatgagaagatggccgcgataggtgagctgacccgttcg
gcatttacggataataaattgctctatgaggacgcggcaccgtttctttatatgcaggat
ctgattgagggcagaaagaaaaatacgaagatcaaacatctatttattgacgaagcccag
gactattcaccgtttcagatggcttacatgagaagcatttttccggctgccagcatgaca
gtgctcggtgatatcaatcagtccatctacgcgcataccatacacggggatcagcgtatg
gatgcgtgctttgaggatgatcctgctgagtatgttcgtttaaagagaacatacagatca
acaaggcagattgtcgagtttaccaaagcgatgcttcaagatggagcggatattgagccg
tttaatagaagcggggaaatgccgctcgttgttaaaactgaaggacatgagagcctttgc
caaaagctcgcgcaagaaattggccggctcaagaaaaaagggcacgaaacaatagccgtc
atctgcaagactgcgcagcaatgcatacaggcgcacgcccacatgagtgaatatacagat
gttcgcctgattcataaagaaaatcaaccatttcaaaagggtgtttgcgtgattccggtg
tatttagcgaagggaattgaatttgacgcagtgcttgtctatgatgcatctgaagaacac
tatcatacagagcacgaccgcaggcttttatatactgcgtgcacccgtgcgatgcacatg
ctggcggtattttatacaggtgaagccagtccgtttgtaaccgctgtgccgcctcactta
tatcagatggctgaatga
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