Bacillus subtilis subsp. natto BEST195: BSNT_10002
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Entry
BSNT_10002 CDS
T02607
Symbol
sigL
Name
(GenBank) RNA polymerase sigma-54 factor (sigma-L)
KO
K03092
RNA polymerase sigma-54 factor
Organism
bso
Bacillus subtilis subsp. natto BEST195
Pathway
bso02020
Two-component system
bso02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bso00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BSNT_10002 (sigL)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BSNT_10002 (sigL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bso03021
]
BSNT_10002 (sigL)
Transcription machinery [BR:
bso03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BSNT_10002 (sigL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
MarR_2
HTH_17
DUF1425
HTH_IclR
HTH_23
Sigma70_r4
HTH_21
Motif
Other DBs
NCBI-ProteinID:
BAI87027
LinkDB
All DBs
Position
complement(3342527..3343867)
Genome browser
AA seq
446 aa
AA seq
DB search
MYNEERGVSMMDMKLQQVQVLKPQLTQELRQAITLLGYHSAELAEYIDELSLENPLIERK
ETDTPPLSYHKTNKNRMNAQEAGLQLSNPQKTLQDALKQQSLDMNLTNTEKKIFNYLIHS
LDSNGYLEEDVEEAARRLSVSAKETEAVLAKLQSLEPAGIGARSLQECILLQLQRLPNRN
EQAEMLVSAHFDAFAQKKWKALSVETGIPLHTIQDISDDIAALHPRPGLLFARPEQDVYI
EPDIFITVKNGHIAAELNTRSFPEIDLHPQYRTLLSSGSCQDTVSYLSAKYQEWRWLSRA
LRQRKQTITRIINELITRQKDFFLKGRSAMKPLTLREVADCLSLHESTVSRAIKGKTIQT
PYGLFEMKLFFSAKAEASGDGDASNYAVKTHLENLINQEDKTKPLSDQKLVDLLYEQHGI
QISRRTVAKYRDQMNIPSSAARKRYK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtacaatgaagaaaggggagtgagcatgatggatatgaaacttcagcaagtacaagta
ttaaagcctcaactgacacaggagctcaggcaggccatcacgctgcttggctatcattcg
gcagaactcgccgagtacattgatgagctctcactggaaaaccctcttattgaacgaaag
gaaacagacacaccgccactatcttaccataaaacaaacaaaaacaggatgaatgcacag
gaagcgggccttcaattaagtaatccgcaaaaaacattgcaggatgcgttaaaacagcag
tcactcgatatgaatctgaccaacactgaaaaaaagatttttaattatctgattcattcg
cttgattcaaacgggtacttggaagaagatgtggaggaggcagcacggcgcctatctgta
tcggctaaggaaacggaggctgttttggcaaaactccagtcgttagaaccggctggaatc
ggcgcgagatctttgcaggaatgcatccttcttcaattacagcggctgccgaacagaaat
gaacaagcggaaatgctggtttcagctcattttgatgcttttgcacaaaaaaaatggaaa
gcgctttcagtggagacaggaattccgcttcatactattcaagatatctcagatgatatc
gcggctcttcatcctagacctggccttctgtttgcccggccagagcaagatgtgtatatt
gagcctgatatttttatcaccgtaaaaaacgggcacattgcagcggaactgaatacccgc
tcgtttcccgagatcgatctgcatccgcagtacagaacgcttttatcatccggctcctgt
caggatactgtctcctatttatctgcgaaatatcaggagtggcgctggctgagccgcgcg
ctgcggcagcgaaaacagacaatcacgagaattatcaatgaactgatcacacgccaaaag
gatttctttctgaaagggcgaagcgcaatgaagccgctgactctcagagaggtggcggac
tgtctaagccttcatgaatcaactgtgagccgggccattaaagggaaaacaatacaaacg
ccttacgggctgtttgagatgaaactctttttctcagcaaaagccgaggcttcaggtgat
ggagatgcgtcgaattatgcagtcaaaacgcatctggaaaacctgatcaatcaagaggac
aaaacaaaaccgctttcagaccaaaagcttgtcgatttgctgtatgaacaacatggcatc
caaatctcgagacgcaccgtggcaaaatatcgcgaccaaatgaatattccgtcatcggca
gcgagaaagcgatataaataa
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