KEGG   Betta splendens (Siamese fighting fish): 114845605
Entry
114845605         CDS       T08231                                 
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X1
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
bspl  Betta splendens (Siamese fighting fish)
Pathway
bspl04010  MAPK signaling pathway
bspl04137  Mitophagy - animal
bspl04141  Protein processing in endoplasmic reticulum
bspl04210  Apoptosis
bspl04217  Necroptosis
bspl04621  NOD-like receptor signaling pathway
bspl04622  RIG-I-like receptor signaling pathway
bspl04920  Adipocytokine signaling pathway
bspl05132  Salmonella infection
bspl05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:bspl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    114845605
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    114845605
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    114845605
  09143 Cell growth and death
   04210 Apoptosis
    114845605
   04217 Necroptosis
    114845605
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    114845605
   04622 RIG-I-like receptor signaling pathway
    114845605
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    114845605
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    114845605
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    114845605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bspl03019]
    114845605
   04121 Ubiquitin system [BR:bspl04121]
    114845605
Enzymes [BR:bspl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     114845605
Messenger RNA biogenesis [BR:bspl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     114845605
Ubiquitin system [BR:bspl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    114845605
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 Sina_ZnF MATH EFL1 DUF1410 TRAFD1-XIAF1_ZnF zf-C3HC4_4
Other DBs
NCBI-GeneID: 114845605
NCBI-ProteinID: XP_028989630
UniProt: A0A6P7L6G8
LinkDB
Position
19:complement(541109..551210)
AA seq 568 aa
MAAQEPSPPSSLEGNKPGFPKKILANSLEDKHLCNSCQKILRRPLQAQCGHRYCAFCFHK
IVSCGPQKCNACIKEDLFEESTSILKQGGAFPDNAARREVEALAAVCPNEGCSWMGTIKE
FEANHEGNCEFMIILCPSCKELMRANEQERHNERECPERTLNCKYCKEPFLLKNIKAHDE
ICPKFPMICEGCAKKKIPREKYVDHIKLCSKFKAPCRFHVVGCDTSVEKEKIHEHERQCS
YEHLNLLLHFIMGIKVSLESLQPQSLEMASHKLQELHQSLRDLEVKMNQLGGAGAAPVQG
ACASTLSTYFTPLPSAVGAALDLQLQSEKTKVTELSRRCQELELKVSTFENIICVLNREM
ERSCATMEAYNRQHRLDQDKIEILNNKVRQLERTVSLRDLSIMEMEAKMRELSAATYDGI
FVWKISDFTKKRQDAMAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRSSHLSLFFVV
MRGHSDALLKWPFNQKVTLMLLDQNNKEHIIDAFRPDISSSSFQRPVSDMNIASGCPLFC
PLSKLDSKNSYIRDDTIFIKAIVDLTGL
NT seq 1707 nt   +upstreamnt  +downstreamnt
atggctgcacaggagccatctccaccatcttccttggaaggcaacaagccaggcttcccg
aagaaaatcctagccaacagtctggaagacaagcatttgtgcaactcgtgccagaaaatc
ctgaggaggcctctgcaagcgcagtgcggccatcgctactgtgccttctgcttccacaag
atcgtgagttgtggaccacagaaatgcaatgcttgcatcaaggaagacctgtttgaggag
tccacctctattctcaagcaaggtggtgcgttcccagacaatgcggctcggagagaagtg
gaggccttggcagccgtgtgtcccaacgagggatgctcatggatgggaaccatcaaagag
tttgaggccaaccacgaggggaactgtgagttcatgatcatcctgtgtccttcctgtaaa
gagctgatgcgagccaacgaacaggagcgacacaacgagagagaatgtccagagagaaca
ctcaactgcaaatactgcaaagaacccttcctgttaaagaacataaaggctcatgatgag
atctgtccaaagtttccaatgatttgtgaaggttgtgcaaagaagaagatcccgagagaa
aagtatgtggaccatattaaactctgcagtaaatttaaagcaccgtgcagatttcatgtt
gttggctgcgatacctctgtggagaaagaaaagattcatgagcatgaacgtcagtgttcc
tacgagcaccttaacctcctgctgcatttcatcatgggcattaaagtgagcctggagagc
ctgcagccccagagcttggagatggctagccataagctacaggagctccaccagtccctc
agggacctagaggtaaaaatgaatcagctgggtggtgctggtgcggctcccgttcagggt
gcttgtgcttccaccctctccacctacttcaccccactgcccagtgctgtgggtgccgcc
ctggaccttcagcttcaaagtgaaaagaccaaggtgacggagctgagccggcgctgccag
gagctcgagctcaaagtgagcacgttcgagaacatcatctgcgtcctgaatagagaaatg
gagcgatcctgtgccaccatggaggcctataaccgccagcataggctggaccaggataag
atcgagatcctcaacaacaaggttcgtcagctggagaggacggtgagcctcagagacctg
tcaatcatggagatggaggcgaaaatgagagaactgtctgcagccacgtatgatggcatc
tttgtctggaagatatcagatttcactaagaagaggcaggatgccatggctggccgcgcc
cctgccatgttctctcctgccttttacaccagtaaatacggctacaagatgtgcttacgg
atctacctgaacggtgatgggacgggccggagctcccacttgtcactgttctttgtggtg
atgagggggcacagtgacgcactgctcaagtggccgttcaatcagaaggtcaccctaatg
ctgctggatcagaacaacaaggagcacatcattgacgccttccggcccgacatctcgtcg
tcttcgttccagaggccagtcagtgatatgaacattgcaagcggctgcccactcttctgc
ccgctctcaaagctggactctaaaaactcatacattcgcgatgatacaattttcatcaaa
gccattgtagacctcacggggctctaa

DBGET integrated database retrieval system