Betta splendens (Siamese fighting fish): 114848312
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Entry
114848312 CDS
T08231
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114848312 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bspl04131
]
114848312 (c9orf72)
Membrane trafficking [BR:
bspl04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
114848312 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
DUF7645
Motif
Other DBs
NCBI-GeneID:
114848312
NCBI-ProteinID:
XP_028994556
UniProt:
A0A6P7LIL4
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All DBs
Position
22:complement(13024463..13034946)
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AA seq
462 aa
AA seq
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MSSGCPPQSPAVAKSEVAVEGECPLLAATFAYWDNILGPRVRHIWVPKGEQLMFLSDGEI
TFLANHTLNGEILRSAECGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQT
ELAFYLPLHTICVERLKHVIRKGRIWMQKGYNIISVLSLEIVPIMELLASMKTHSVPEDI
DIKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSIVVGSNPEKVNKIVRTLCLFLTQAE
RKSSRLCRADSSFKYDTGLFVQGLLKDSTGSFVLPFRQVLYSPYPTTHIDVDINTVKQMP
PCHEHTYNQRRYMRSELSTLWKTDSEEDIPPDTVIHTDEAFTPDLNIFQDVAHTDTLVKS
FIDEVFMLKPGLSLRSTYLAQFLLLLHRKALALLKYIEDETQKGKKPFRSLRNLKTDLDL
TVEGDLTIVMAFAEKLRAGLHSFVFGKPFLTSMQERDVLMSF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctggctgcccaccccagtcacctgctgtggcaaagtctgaggtagcagtggag
ggagaatgcccactcctggctgccaccttcgcctactgggacaacatcctgggcccacgc
gtgcgccacatctgggtgccaaagggcgaacagctgatgttcctcagcgatggagagatc
acctttttggcaaatcacacccttaatggagagattctgcgcagcgcggagtgcggcgct
gtggacgtgaagttcttcgtcctggcagaaaagggcgtcatcatcgtctctctcatcttc
gatggagagctgaagggggacaaaaacacgtgcgccctgtccatcatcctgcctcagacg
gagctggcgttctacctgcctctgcacaccatctgcgtggagaggctaaaacatgtcatc
cgtaaggggcgcatttggatgcagaagggctacaacataatttctgtgctgagcttggag
attgtacccattatggagctgctggcatccatgaagacacacagtgtgccagaagatata
gatataaaagacacggtgctaaatgatgatgacatcggggacagctgccacgaggatttc
ctccacaaggccatcagctcccatctacagacgtgtggctgttcaatagtggttggaagc
aacccagagaaagtgaataagatcgtgcggacgctctgcctcttcctcacccaggcggag
aggaagagctctcgcctgtgcagggctgactcttccttcaaatatgacacggggctgttt
gttcagggtctgctcaaggactccacgggcagcttcgtcctgcccttccgccaggtgctc
tactcgccgtacccgaccacgcacatcgacgtggacatcaacacggtgaagcagatgccg
ccgtgccacgagcacacgtacaaccagcggcgctacatgcggtcggagctgagcacgctg
tggaagacggacagcgaggaggacattcctccagacacggtcatccacaccgacgaggcc
ttcacgcccgacctgaatatatttcaagacgttgcgcatacagatactttggtcaagtca
tttatagatgaggtgttcatgctgaagccgggcctgtccctgcggagcacctatctggcc
cagttcctgctgctgctccacaggaaggcgctcgcgctgctcaagtacatcgaggacgaa
acgcaaaaagggaagaagccattccggtctctgcgcaacttaaagacggacctggatctg
acggtggaaggagacctgaccatcgtgatggccttcgctgagaagctgcgggcgggacta
cactcgttcgtgttcgggaagcccttcctcaccagcatgcaggagcgagacgtactcatg
agcttctga
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