Betta splendens (Siamese fighting fish): 114848462
Help
Entry
114848462 CDS
T08231
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04620
Toll-like receptor signaling pathway
bspl04621
NOD-like receptor signaling pathway
bspl04622
RIG-I-like receptor signaling pathway
bspl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
114848462 (traf3)
04621 NOD-like receptor signaling pathway
114848462 (traf3)
04622 RIG-I-like receptor signaling pathway
114848462 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114848462 (traf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
Fez1
zf-rbx1
ATG16
zf-TRAF_2
Leu_zip
CCDC113_CCDC96_CC
GAS
Baculo_PEP_C
Sina_ZnF
RING_XB3-XBAT31
DUF724
Spectrin_Anc-1
CENP-K
zf-RING_6
Cauli_AT
Snapin_Pallidin
KIF9
DUF1664
FapA
CENP-F_leu_zip
Fzo_mitofusin
Lectin_N
DUF4618
TPR_MLP1_2
KxDL
Synaptobrevin
AIG1
V_ATPase_I
TolA_bind_tri
PUMA_CC
Rx_N
Motif
Other DBs
NCBI-GeneID:
114848462
NCBI-ProteinID:
XP_028994777
UniProt:
A0A6P7LL48
LinkDB
All DBs
Position
22:complement(81728..88575)
Genome browser
AA seq
595 aa
AA seq
DB search
MSAGRSADGREVQIPLQQVAPSLATPLTVAPPIASSSHRPSSSWPLNDPTTSQGFPAGFL
PLHGGFRDHFVDTPESKYQCEDCNLVLCQPRQTECGHRFCQSCISSILSRPNPVCPADRE
PLFKDKIFRDVCCHREIMGLKVYCRSEANGCEEQMSLQQIPDHLNVCPFFEVPCPLGKCK
ERMMRKEIPDHLSWKCKHRETTCEFCMTKMPLTELQKHKETVCPAFPVSCPNHCSFSSLP
RSELSSHQHDCPKAQVSCQFHRYGCTFKGLNQDMRQHESTFAAEHLRIMASRNSSLEKKV
EDVKSEMLERYKVLPALSNRLSELENQNEELKEKNRQMEQKLATMQKLMSSHSEKLMEVE
LEVRALRQFRDEVENLRGTLENVRTRLNALEQGGRSGTGSATHTLASLETQLSRHDDMLS
VHEIRLADMDLRFQVLETASYNGTLIWKIRDYKRRKQEAVAAKTLSLYSQPFYTGYFGYK
MCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFK
PDPNSSSFRRPQAEMNIASGCPLFVSQSVLETGSYIKDDTIFIKVTVDTSDLPDP
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaggcaggagtgctgacgggagggaggttcaaattcccctccagcaggtggcg
ccctccctggccacgccccttacagttgcccctcccattgcttcatcctctcatcgtccg
tccagttcctggcctctgaatgaccccactacttcacaaggttttcctgcaggttttctg
ccccttcatggtggattcagagatcacttcgtagatactccagagagcaaataccagtgc
gaggactgtaatctggttttgtgtcagcctcggcagaccgagtgtggacaccgattctgc
cagagctgcatcagcagcatcctcagtcgtccaaacccagtgtgtccggccgacagagaa
cctctgtttaaagacaagatcttcagagacgtttgctgccatcgggagatcatgggtctg
aaagtttactgtcgcagtgaagccaatggctgtgaggagcagatgagtctgcagcagata
cctgaccacctgaacgtgtgtccgttctttgaggttccctgtcctttgggcaaatgtaaa
gagcgaatgatgaggaaggaaattcctgaccacctgagctggaaatgtaaacacagagag
accacctgcgagttctgcatgaccaagatgcctctgactgagctgcagaaacacaaggag
acggtgtgtccagcattcccagtgtcatgtcccaaccactgctccttctcctctctgccc
cggagtgagttgtccagtcaccaacacgactgtcccaaagctcaggtgagctgtcagttt
caccgctatggatgcaccttcaagggtttgaaccaggacatgaggcaacacgagtccacg
tttgcagctgaacacctgagaataatggccagtaggaactcctctttggagaaaaaggtc
gaggatgttaagagtgagatgctggagagatataaagtgctcccggctctgagcaaccgt
ctgtccgaactggaaaatcaaaacgaagagctgaaagagaagaaccggcagatggagcag
aaactggccaccatgcagaaactgatgagctctcactcagagaaactgatggaggtggag
ctggaggtccgtgctcttcgtcagttcagagacgaggtggagaacctaaggggaacactg
gagaacgtacggacaaggctgaatgctttggaacaaggggggcgcagcggaactgggtcc
gccacacacactctagcatccctggaaacacagctcagtcgccatgatgacatgctgagt
gtccacgagattcgactggcagacatggacctgcgcttccaggtgttggagaccgcaagt
tacaatgggactctgatctggaaaatccgggattacaagagacggaaacaggaagcggtg
gcagctaaaacgctgtctctgtattcacagccattttacaccggatactttggatacaag
atgtgcgcccgggtttacctgaatggagacgggatgggcaaagggacacacctgtcgctg
ttctttgtggtgatgaggggcgagtacgatgctttgctgccatggcctttcaaacagaag
gtgactctgatgctgatggaccagggtccatccaggaaacacctgggtgatgcttttaaa
ccagatcctaacagcagcagcttcagacgtcctcaagcagagatgaacatcgcctctggc
tgtcctctgtttgtgtcccagagtgtcctggagacaggcagctacatcaaagatgacacc
atttttatcaaggttaccgtagatacctctgacctccctgacccatga
DBGET
integrated database retrieval system
