Betta splendens (Siamese fighting fish): 114849528 Help Entry 114849528         CDS       T08231                                  Symbol thbs1b Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism bspl  Betta splendens (Siamese fighting fish) Pathway bspl04115   p53 signaling pathway bspl04145   Phagosome bspl04148   Efferocytosis bspl04350   TGF-beta signaling pathway bspl04510   Focal adhesion bspl04512   ECM-receptor interaction bspl04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:bspl00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     114849528 (thbs1b)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     114849528 (thbs1b)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     114849528 (thbs1b)    04148 Efferocytosis     114849528 (thbs1b)   09143 Cell growth and death    04115 p53 signaling pathway     114849528 (thbs1b)   09144 Cellular community - eukaryotes    04510 Focal adhesion     114849528 (thbs1b)   09142 Cell motility    04820 Cytoskeleton in muscle cells     114849528 (thbs1b)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:bspl04131]     114849528 (thbs1b)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:bspl00536]     114849528 (thbs1b) Membrane trafficking [BR:bspl04131]  Endocytosis   Phagocytosis    Opsonins     114849528 (thbs1b) Glycosaminoglycan binding proteins [BR:bspl00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    114849528 (thbs1b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 TSP1_ADAMTS cEGF Laminin_G_3 EGF TSP1_CCN Motif Other DBs NCBI-GeneID:  114849528 NCBI-ProteinID:  XP_028996931 UniProt:  A0A6P7LPZ8 LinkDB All DBs Position 24:12793063..12802531 Genome browser AA seq 1167 aa AA seqDB search MKLTGIFLLLMLWTCESARVAESREDDSVYDLFELVQVPRKNGGVTLVKGDDPYSPAYKI LNPDLIPPVPESAFRDLIDTIHAERGFLLLLNFKQFKRTRGSLLTVEKLDGSGPVFEVVS NGKANTLDIVFSTENKQQVVSIEEADLATGHWKNITLFVQEDRALLYAGCEEVNAAELDA PIQSILTHETPGGARLRIGKGAVKDRFMGVLQNVRFVFGTTLDAILRNKGCQSSLDTLNL ENLNGSSAIRTEYTGHKTKDLQMVCGFSCEDLVSMFKELRGLGVVVKELSNDLRQLTDEN KLIKNHIGIHTGVCIHNGIVHKNRDEWTVDVCTECTCQNSATVCRKISCPLIPCANATVP DGECCPRCGTPSDYAEDGWSPWSEWTHCSVSCGRGTQQRGRSCDRINNNCDGTSVQTRDC YLQECDKRFKQDGNWSHWSPWSSCSVTCDSGVITRIRLCNSPTPQFGGKECKGEGRQTET CHKSPCPINGNWGPWSPWNACTLTCGGGAQTRTRLCNGPAPQYGGKECVGEAKDSQICNK KACPVDGCLSNPCFAGAKCTSFPDGSWKCGKCPTGYAGNGVKCKDINECKEVPDACFEFN GVHRCENTDPGYNCLPCPPRYSGPQPFGKGVEQAAANKQVCTPRNPCLDGSHDCNKNARC NYLGHFADPMYRCECRPGYAGNGHICGEDTDLDGWPNADLICVENATYHCKKDNCPNLPN SGQEDYDKDGIGDACDNDDDNDGIPDDRDNCPFIYNPRQYDYDRDEVGDRCDNCPYNSNP DQTDTDNNGEGDACAVDIDGDGILNEKDNCPYVYNVDQKDTDLDGVGDMCDNCPLEHNPD QVDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDDDNDGI PDEKDNCRLAFNPDQVDSDGDGRGDACKDDFDQDNVPDIYDVCPENFDISETDFRKFQMV PLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYHEFNAVDFSGTFFINTERDDDYA GFVFGYQSSSRFYVVMWKQITQTYWSNKPTKAQGYSGLSIKVVNSTTGPGEHLRNALWHT GNTPGQVRTLWHDPKNVGWKDFTAYRWHLIHRPRTGHIRVVMYEGKKIMADSGSIYDKTY AGGRLGLFVFSQEMVYFSDLKYECRDA NT seq 3504 nt NT seq  +upstreamnt  +downstreamnt atgaagttgaccggaatttttttgctgctgatgctttggacctgcgagagcgcgagggtc gcagagagccgcgaggacgacagcgtgtacgacctgttcgagctggtccaggtgcccagg aagaacggcggggtgacgctggtgaagggggacgacccgtacagccccgcctacaagatc ctcaacccggacctgatccccccggttcccgagagcgccttcagggacctgatcgacacc atccacgccgagaggggcttcctgctgctgctcaacttcaagcagttcaaacgcacccgc ggcagcctgctgacggtggagaagctggacggctccgggcccgtcttcgaggtcgtctcc aacggcaaagccaacaccctggacatcgttttctccaccgagaacaagcagcaggtggtc tccatcgaggaagcggacctggccacgggccactggaagaacatcacgctgttcgtgcag gaggaccgcgcgctgctgtacgcggggtgcgaggaggtgaacgcggccgagctggacgcg cccatccagagcatcctgacgcacgagacgccgggcggcgcgcgcctccggatcgggaag ggcgccgtgaaggaccggttcatgggggtcctacaaaacgtgcgctttgtgttcggaacg acgctggacgccatcctccgcaacaaaggctgccagagctcgctcgacaccctgaacctg gagaacctcaacgggtcgtcagccatcagaaccgagtacactggacacaagactaaagac ctgcagatggtctgtggcttctcctgtgaggatctggtcagcatgttcaaggagctgagg ggcctcggcgtggtggtgaaggagctgtccaacgatctccgccagctgacggacgagaac aaactcatcaagaaccacatcggcatccacacgggcgtctgcatccacaacggcatcgtg cacaagaaccgggacgagtggaccgtcgacgtgtgcacagagtgcacttgtcagaactct gctaccgtgtgccgcaagatctcctgccccctgatcccttgtgcaaacgccactgttccc gatggagagtgctgcccgcgctgtggaacaccgagcgactatgcagaggacggctggtcg ccgtggtctgaatggactcattgttctgtgtcatgtgggcggggcacccagcagcgtgga cgctcctgcgaccgtatcaataacaactgtgatgggacctctgttcagacccgtgactgc tacctccaggagtgtgacaagcgcttcaagcaggatggcaactggagccattggtcccca tggtcttcctgctccgtcacctgcgattctggtgtaatcacccgtatccgcctctgcaac tcccccacgccacagttcggaggcaaggagtgcaaaggagagggccggcaaacagagacg tgtcacaagtctccctgccccatcaatggcaactggggaccgtggtcaccgtggaacgcg tgcactctcacctgtggaggtggcgcccagactcgtacacgcctgtgcaacggccctgca ccacaatacggtggcaaggagtgtgttggtgaagccaaagactcccagatatgcaacaag aaagcctgccctgtcgacggctgcctatctaacccctgctttgctggagcaaagtgcacc agtttccctgatgggtcctggaagtgtggaaagtgtccaactggctacgctggcaacggt gttaaatgtaaagacatcaatgagtgcaaggaggtcccagacgcttgctttgagtttaac ggtgtgcaccgctgcgagaacacagatcctggctacaactgtctgccctgccctccgcgc tactcaggacctcagccgttcggcaagggtgtggagcaggctgcagctaataaacaggta tgcacaccccgtaatccctgccttgatggaagccacgactgcaacaaaaatgctcgctgc aactaccttggacactttgcagatcccatgtaccgctgtgagtgcaggcctggttatgct ggaaacgggcacatctgtggcgaggacactgacctggatggatggccgaacgctgacttg atctgtgtggagaacgccacctaccactgcaagaaggacaactgccccaacctccccaac tctgggcaggaagattacgataaggacggcattggagacgcttgtgacaacgatgacgac aacgatggaatccctgatgacagagacaactgcccgttcatttacaaccccaggcagtac gactatgatcgtgatgaagtgggcgaccgctgtgacaactgcccctacaacagtaatcca gaccagacggacacagacaacaatggagagggagacgcctgcgcagtggacatcgatgga gatggcatactgaatgagaaagacaactgtccctatgtttacaatgttgaccagaaggac accgacctggacggagtgggagacatgtgcgataactgtcctttggaacataatcctgac caggtggattcagacgacgaccgtgtgggagacaagtgtgacagcaaccaggacatagat gaggacgggcaccagaataacctggacaactgtccgtacatccccaacgccaaccaggcg gaccatgacaaggacggcaaaggcgacgcctgtgaccacgatgatgacaatgatggcatt cctgatgagaaggacaactgcagattggccttcaaccctgatcaagtggattctgatggt gatggccgtggggatgcctgcaaagacgactttgaccaggacaatgtgcctgacatctat gacgtctgtccagaaaactttgatattagtgagactgacttccgcaagtttcagatggtt cctctggaccctaaaggcacctcccagattgatcctaactgggttgtccgccatcaaggc aaggagctggtgcagactgtgaactgcgaccctggcatcgctgttgggtaccatgagttc aatgcagtggactttagtgggaccttcttcatcaatacagagagggacgatgattacgca gggtttgtgtttggctaccagtccagctccaggttctatgtcgtaatgtggaagcaaatt acccaaacgtactggtctaataaacccaccaaggctcagggatactctggcctgtccatt aaagtagtcaactccaccactggccctggagaacatctcaggaatgccctctggcacact gggaataccccaggacaggtccgcactctctggcatgaccccaaaaatgttggatggaaa gacttcactgcctacagatggcatctgatccacaggccgagaacaggacacattagagtt gtgatgtatgaaggtaagaagatcatggcagattctggaagcatctatgacaagacgtac gccggtggcaggctcgggctctttgtcttttcacaggagatggtttacttctcagacctc aagtacgaatgcagagatgcataa

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