Betta splendens (Siamese fighting fish): 114849847
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Entry
114849847 CDS
T08231
Symbol
trpc5a
Name
(RefSeq) short transient receptor potential channel 5a
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bspl01009
]
114849847 (trpc5a)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bspl04040
]
114849847 (trpc5a)
Protein phosphatases and associated proteins [BR:
bspl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114849847 (trpc5a)
Ion channels [BR:
bspl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114849847 (trpc5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_5
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
114849847
NCBI-ProteinID:
XP_028997430
UniProt:
A0A6P7LT26
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All DBs
Position
2:complement(18351275..18424000)
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AA seq
1092 aa
AA seq
DB search
MNPMTQLYYKKATYSPYRDRIPLQIVRAEVELSAEERAYLTAVEKGDYAGVKHALREAEV
YYNMDVNCLDPLGRSALLIAIENENLEIMELLLDHGIHTGDALLYAIRKEVVGAVELLLS
HRRPSGEKQVPSLMMDSQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKRFAKDLLDQARSSRELETILNHRDNDQSEELDPRQCHDLAKLKLAIKY
HQKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFIIGLLFPVFSLIYLLAPKSAL
GRFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNLHMQGPPPTIVEWMILPWVLGFIW
AEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTL
IAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASEEPNNCKGIRCERQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIIPSPKSFWYLLRWLHNKLCRSGQPPGEDTHKCENLREFTERHADSLIQNQHYQ
EVIRNLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRRPPRRHYSSS
SETVKDDGAMASEDDSESGDIGGVGGQRSKGVTFMTPLEDDVGPTPTLGVSALVRSISGM
TRGEKGEEGEEGELEEGLVWGEEEEEEEGKPKSNGLKTAVISPSSTAALPSPSSSFSSAL
SSSLARTRSRLQRLSAPRTKTDSFKRLSYLFSRSKRRAPPMPLPLQSPPSYTISDGLLRP
LGSHSRSDFGLSDVTRSETRLNEVGRSVDIGNASFSPRRTNGRDSLLTLPLPPPCPCQSL
HCASNMSESSSRLLDSSEDVFQVGGIGGAGERGVAGGDGGGGLMVMGGWVGPCDSVIEDN
CDVIEDSVTTQL
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatgacacagctgtactacaagaaggcgacgtactcgccgtaccgcgaccgc
atcccacttcagattgttcgggctgaagtggagctgtctgcggaggaaagggcctacctc
accgccgtagagaaaggcgactatgcaggggtcaaacatgcccttcgtgaggcagaggtc
tactacaacatggacgtcaactgcctggacccgctgggccgcagcgcgctgctcatcgcc
atcgagaacgagaacctggagatcatggagctcctgctggaccacggcatccacacgggc
gacgcgctgctctacgccatcaggaaggaagtggtcggcgccgtggagctgctgctgtcg
cacaggaggcccagcggagaaaaacaggttccgtcgctgatgatggacagtcagttttca
gagttcaccccggacataactcccatcatgctcgctgctcacaccaacaactacgaaatc
atcaaactacttgtacagagaaaggtcactatccccagaccacatcagatacggtgtgat
tgtgttgaatgtgtgtccagttcagaggttgacagccttcgacactcccgttctcgactc
aacatctacaaggccctggcctcgccctctctcattgcactttctagtgaagatcccatc
ctcaccgccttcagactgggctgggaactcaaagaacttagcaaggtagagaatgagttt
cgtcaagagtatgaggagctatcgcagcagtgcaaacgtttcgccaaggatcttctggat
caggccaggagttctcgagaactggagactatcctgaaccacagagacaatgatcagagc
gaggaactggaccccagacagtgccacgacctagcaaagctcaaactggccatcaagtac
caccaaaaagagtttgtggcgcagccgaattgccagcagcttctggcgacactgtggtac
gacggcttcccaggctggaggagacggcactgggcggtcaaactggtcacgtgcttcatc
atcgggctcctgttccccgtcttctcactgatctacctgttggctcctaaaagcgctctg
ggacgctttatcaagaagcccttcatcaagttcatctgtcacacggcgtcctacctgacc
ttcctcttcctgctgctgctggcctcgcagcacatcgcccgcaccaacctgcacatgcag
ggtccgccgcccaccatcgtggagtggatgattctgccctgggtgctcggcttcatctgg
gcagagattaaggagatgtgggatgggggattcacagagtacatccacgactggtggaac
ctgatggacttcgccatgaactccctctacctggccactatatcactgaagatagtggcc
tacgtgaagtacaattcctctcggccgcgggaggagtgggagatgtggcatccgacgcta
atagctgaggctctgtttgccattgccaacatcttcagctcgctcaggctcatctcgctc
ttcacggcgaactcccacctggggcccctgcagatctcattagggaggatgctgctggac
atcctcaagtttctcttcatttattgtctggtcctgctggcgtttgccaatggtctgaac
cagctgtatttctactatgagaccaaggcgtcggaggagcccaacaactgcaaaggcatc
cgctgtgagaggcagaacaacgccttctcaacgttatttgagactcttcaatcactgttc
tggtccatattcgggctgttaaacctctacgttaccaatgtgaaggcccggcacgagttc
acggagttcgtcggggcgaccatgttcgggacgtacaacgtcatctctctggtggttctg
ctcaacatgctgattgccatgatgaacaactcctaccagctcatcgctgaccacgcggac
atcgagtggaagtttgcacgcaccaaactctggatgagttacttcgacgagggcggcacc
ctcccgcctcccttcaacatcatccccagccccaagtccttctggtacctgctcaggtgg
ctccacaataaactgtgcagaagtggtcagccgcccggggaggacacgcacaaatgtgaa
aatctcagagagttcacagagcgtcacgccgacagcctgatccagaaccagcattaccag
gaagtgatccggaacctggtgaagaggtacgttgcagccatgatacgcagcgccaagaca
gacgaaggactgacggaggagaacttcaaggagttgaaacaggacatttccagctttcgt
tacgaggtcctggatttactcggcaaccggcgtcctcctcggcgccactactcctcctcc
agcgagacggtgaaagacgacggtgccatggcctcagaggacgacagcgaatcaggggac
attggtggagtgggaggtcaaaggtcgaagggcgtgaccttcatgacgccgctggaggac
gacgtcgggcccacaccgacgctcggcgtctctgccttggtgcgctccatttcaggcatg
acccggggcgagaagggggaggagggggaggagggggagctggaggagggccttgtgtgg
ggggaggaggaggaggaggaggagggcaaaccaaagagcaacgggctgaagacagcggtc
atctccccgtcctccaccgccgccctcccctcgccgtcgtcctccttctcctcggcgctg
tcgtcgtcgctcgcccgcacgcggagccgcctgcagcgcctgtcggcgccgcggacgaag
acggactcgttcaagcgcctctcctacctgttctcccgctccaagcgccgcgctccgccc
atgcccctccccctccagtccccgccctcctacaccatctccgacgggctgctccgcccc
ctggggagccacagccgctccgactttggactcagcgacgtgaccagaagcgagacgcgc
ctcaatgaggtgggccgctcggtcgacatcggcaacgcgtccttctcgccgcggcgaacc
aacgggcgggactcgctgctgacgctgcccctcccgcccccgtgcccctgccaatccctg
cactgtgcttccaacatgtccgagtccagctcgcgcctcctggactccagcgaggacgtt
ttccaggtcggcggcatcgggggcgcgggggagcgcggcgtcgccgggggggacggaggg
ggggggctgatggtgatgggcgggtgggtggggccgtgcgacagcgtcatagaggacaac
tgtgatgtcatagaggactcggtgacgacgcaactgtag
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