Betta splendens (Siamese fighting fish): 114852159
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Entry
114852159 CDS
T08231
Symbol
traf6
Name
(RefSeq) TNF receptor-associated factor 6 isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04010
MAPK signaling pathway
bspl04120
Ubiquitin mediated proteolysis
bspl04140
Autophagy - animal
bspl04144
Endocytosis
bspl04620
Toll-like receptor signaling pathway
bspl04621
NOD-like receptor signaling pathway
bspl04622
RIG-I-like receptor signaling pathway
bspl05132
Salmonella infection
bspl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114852159 (traf6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114852159 (traf6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114852159 (traf6)
04140 Autophagy - animal
114852159 (traf6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
114852159 (traf6)
04621 NOD-like receptor signaling pathway
114852159 (traf6)
04622 RIG-I-like receptor signaling pathway
114852159 (traf6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114852159 (traf6)
09171 Infectious disease: bacterial
05132 Salmonella infection
114852159 (traf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bspl04131
]
114852159 (traf6)
04121 Ubiquitin system [BR:
bspl04121
]
114852159 (traf6)
Enzymes [BR:
bspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114852159 (traf6)
Membrane trafficking [BR:
bspl04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
114852159 (traf6)
Ubiquitin system [BR:
bspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
114852159 (traf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
TRAF6_Z2
zf-C3HC4_4
zf-RING_5
RING_XB3-XBAT31
TRAF3_RING
U-box
zf-RING_11
zf-rbx1
zf-TRAF_2
BLI1
CEP104_ZnF
Motif
Other DBs
NCBI-GeneID:
114852159
NCBI-ProteinID:
XP_029000178
UniProt:
A0A6P7M1W3
LinkDB
All DBs
Position
3:1419449..1424191
Genome browser
AA seq
561 aa
AA seq
DB search
MQMACYGSRLEEDSYDGELSDCALAMMEKERDSLLSPSENPATFMSSTSPSLQIAPVQGY
DVEFDPPLESKYECPICLMALRNAIQTPCGHRFCKNCIEKSLRDAGQRCPVDNEMLLEDQ
LFPDNFAKREILSLTVRCPNADCSEKMELRQLETHLAQCQFATVICPQCHQSVRKRHLEP
HTTVECQRRPVLCPDCAENFVYEERELHEQQCPFAIIKCLYCEIELSRDQMEGHCDADCP
KAPIACNFSYFGCKERMQRHNLAQHMQEFTQMHMRYMAEVVRCLSLNGANKSLWTLGPPV
SSEDPGAAASASVSASSCSRGSVSCAPCQPSEEMQRLREMDGRLVKQDHQLRELIILKET
QAGQLAELRRRVSTLEETVKELESLQCHGVFVWRLRGFSAHLRNQEAGQAIVEHSPGFYT
GSPGYKLCLRLHLQTPNAPRCANYISLFVHAMQGAYDGLLTWPFQGTIRLTILDQGPEGQ
HHMEVMETKPGLQAFQKPTVNRNPKGFGYVTFLHLNQLSQRAFVKDDTLLIRCEVTPRFD
VPHRDGPTVQPRGPEASVSRD
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgcagatggcgtgctacggaagccgtttggaggaggacagctatgacggagagctgtcg
gactgtgccttggccatgatggagaaggagcgggattccctcctcagcccttcagagaat
cctgccacctttatgagcagcacatcccctagtctccagatcgcacccgtccagggctac
gacgtggagtttgacccgccactggagagtaaatacgagtgccccatctgcctcatggct
ctaaggaacgccattcaaacaccatgcggtcaccgtttctgcaagaactgcattgagaag
tctcttcgtgatgcaggacagcgctgccctgtggacaatgaaatgcttttagaagaccag
ctgtttcctgataactttgccaaacgggagattctttcactcactgttcgctgtccaaac
gccgactgctctgagaaaatggagcttcgccagttagagactcatttggcacagtgtcag
tttgccacagttatttgcccacagtgtcaccagtcggtgagaaagaggcacttagaaccg
cacactactgtggagtgtcaacgaaggcctgtgttgtgtccagactgcgctgagaacttt
gtttatgaagaaagagagctacatgagcagcagtgtccctttgcaattatcaaatgtctg
tactgtgagattgaactaagcagagatcagatggaaggccattgtgatgcagattgcccc
aaagcacctattgcctgtaacttcagctactttggatgtaaagaaaggatgcagcggcac
aaccttgcccagcacatgcaggagttcacacagatgcacatgcgctacatggctgaggtc
gtacggtgccttagtctcaacggagccaacaaatccctctggacgcttggacctcctgtg
tcctctgaggatccaggtgctgcagcttcagcctctgtttcagcctcgagttgctccaga
ggatctgtaagctgtgctccatgccagccaagtgaagaaatgcaaaggctgagagagatg
gatggaagattggtgaagcaggatcaccagctacgtgaactcatcatcttaaaagaaaca
caagcaggccagctggcagaactcaggcgcagggtgtcgacgctggaggagaccgtgaag
gaactggaatctctgcagtgccacggcgtcttcgtttggcgcctcagaggtttctctgca
cacttgagaaaccaagaagcgggccaggccatagtcgagcacagccccgggttctacacg
ggcagtccgggctacaagctgtgcctgcgtttacacctgcagacacccaatgcaccgcgc
tgtgccaactacatctccctgtttgtccatgccatgcaaggggcatacgatggactgctg
acatggccgttccaaggcaccatcaggcttaccattctagaccagggccccgagggacag
caccacatggaggtgatggagactaagccaggactgcaggccttccagaagcccacagtc
aaccgcaaccccaaagggttcggctacgtcaccttcctacacctgaaccagctgtcccag
cgagcctttgttaaagatgacacgctcctcattcgctgcgaggtgacgccgcgttttgat
gtgcctcaccgggacggaccaacagtgcagccgaggggacctgaggcatcagtttccaga
gactaa
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