Betta splendens (Siamese fighting fish): 114860155
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Entry
114860155 CDS
T08231
Symbol
ldlra
Name
(RefSeq) low density lipoprotein receptor a isoform X2
KO
K12473
low-density lipoprotein receptor
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03272
Virion - Hepatitis viruses
bspl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
114860155 (ldlra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114860155 (ldlra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bspl04131
]
114860155 (ldlra)
Membrane trafficking [BR:
bspl04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
114860155 (ldlra)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF_3
hEGF
Vgb_lyase
Motif
Other DBs
NCBI-GeneID:
114860155
NCBI-ProteinID:
XP_029014364
UniProt:
A0A6P7N933
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Position
8:836070..842195
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AA seq
878 aa
AA seq
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MLLLLLICVSAQTHARSTCGTSQFQCGSGKCITARWVCDGADDCGDGTDELPGTCSSKTC
RPSEFSCADRLNQCVPGSWRCDGKSDCENGADEASCALRRCSDAEFCCRSGQCVSSSFVC
DHEADCDDGSDEADCPPVTCSASSFQCNNTVCVPLMWLCDGDVDCPDGSDEQDQNCKTRS
SAAPKCSSLEFSCGSGECIHITWRCDEEADCLDASDEASCARPTCRPDEFQCGDGSCIHG
SRQCDHEYDCSDRSDELGCVNATHCDGPTRFKCRSGECISMARVCDGRHHCRDWSDEPLR
ECGSNECLYNNGGCSHVCNDLKIGYECLCPAGFSLVNRKRCEDIDECADPDTCSQICINQ
IGSYKCECKDGYQMDPATKACKAIGTVAYLVFTNHHEVRKMTLDRSEYTRVIPRLKNAAA
LDMNMATKEIYWSDLSQKKIYRAPMDSAKDPANHSLVIGSNIEAPEGIAFDWIHGNLYWT
DSIHGTVSVVTADGSRRKTLFRQDLSKPRAIVVDPHHNFVYWTDWGNPAKIERGGLNGGD
RTALVTDNIVWPNGITLDLLNQRLYWVDSKLHTLSSVNVQGGGRRTLIVDEHQLAHPLGL
TVFEEKVFWTDVSNNAILSANRLTGGDIAPVAEHLSSPEDIILYHNLKQPAGMNWCQVSN
GGCEFLCLAAPQVGTHPPKYTCVCPDHMMLARDMRTCVAAVPTTSAPATSAPTIKAPRAP
PMTTARSPEHTTRAPITATSTSASPHPSTMATPEPKTRPPRPMTPKVPQASTEAPVASAD
DHLEAAASVPKAVSTPTALYVVLPLALVCLLAFGGVLLWRNYRLKNTNTIHFDNPVYQKT
TEDQVHICRSLSHDGYTYPKRQAVSLEDEADNPAFTEN
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttctgctgctcatctgcgtctcggcccagacacacgctcggtcaacatgtgga
accagccagttccagtgtgggagtggaaaatgcatcacggccagatgggtgtgtgacgga
gcagacgactgtggagacggcaccgacgaactccccgggacctgctcgtctaaaacctgc
agaccgagcgagttcagctgtgcagaccgcctgaaccagtgcgtccccggctcctggcgc
tgcgatggaaagtctgactgtgagaacggagctgatgaagcgagctgtgctctcaggcgg
tgctcggacgcagagttctgctgcaggtcgggtcagtgcgtctcgtcctccttcgtgtgc
gaccacgaggccgactgcgacgacggcagcgacgaggccgactgcccccccgtcacctgc
agtgcctcgtccttccagtgcaacaacacggtctgcgtccccctcatgtggctgtgcgac
ggcgacgtggactgtccggatggatccgacgagcaagaccagaactgcaagacgaggagc
agcgccgctcctaagtgctcatccctggagttctcctgcggcagcggggagtgcatccac
atcacctggaggtgtgacgaagaggccgactgcctggatgcatccgacgaagccagctgt
gctcgccccacctgccggcccgatgagttccagtgcggcgacggctcctgcatccacggg
agtcgacagtgcgaccacgagtacgactgcagcgaccggagcgacgagctgggctgcgtg
aacgcgacgcactgcgacggaccaaccaggttcaagtgccgcagcggagagtgcatcagc
atggcgagggtgtgcgacgggcggcaccactgcagggactggtccgacgagcctctgaga
gaatgtggatccaatgagtgtctgtacaacaacggcggctgctcccacgtttgcaacgac
ctgaagatcggctacgagtgtctgtgtccggccgggttcagcctggtcaacaggaaacgc
tgcgaagacatcgacgaatgcgccgaccctgacacctgcagccagatctgcatcaaccag
atcggcagctacaaatgtgagtgtaaggacggttaccagatggatcctgcaaccaaggcc
tgcaaagccatcggaacggttgcgtatctcgtcttcaccaaccaccacgaggtcaggaag
atgactctggacaggagtgaatacacacgggtcatcccccgactgaagaacgctgcagct
ctggacatgaatatggccaccaaggagatctactggtcagacctctcccagaagaagatc
tacagagcgccgatggactcggccaaagacccggcaaatcacagcctcgtgattggcagc
aacatcgaggctcctgaaggcatcgccttcgactggatccacggaaacctgtactggacc
gacagtatccacgggactgtttccgtggtaactgctgatggtagtcgccgcaaaaccctc
ttccgccaagatctatcaaaacccagagcgattgtcgttgacccccatcacaacttcgtt
tactggactgactggggaaatcccgctaagatcgagagggggggtcttaatggaggcgac
cgcactgcgctggtcaccgacaacattgtgtggcccaacggcatcaccctcgacctgctg
aaccagcggctgtactgggtcgactccaagctgcacaccctgtccagcgtgaacgtgcaa
ggcggaggtcgtcgcaccctcatcgtggacgaacaccagctggctcaccctctgggactc
actgtgttcgaggaaaaggtgttctggacggacgtgagcaacaacgccatcctcagcgcc
aacaggctgacgggcggggacattgcaccggtggcagagcacctgtcgtcaccagaagat
atcattctgtaccacaacctcaaacagccggcagggatgaactggtgccaggtgtccaac
ggcggctgtgagttcttgtgtctggcggctcctcaggtgggaacacaccccccgaaatac
acctgtgtgtgccctgatcacatgatgctggcccgcgacatgcggacctgtgtcgctgct
gtgccaacaacctcagctcctgcgacttctgctccaactatcaaagcgccgcgggcgcca
cccatgaccacggccaggtccccggaacacaccaccagggcccccatcaccgccaccagc
acctcagccagcccacatccaagcacgatggccacaccagaaccaaagacccgcccacca
cggccgatgacgccgaaggttccccaggcctccacggaggctccggtcgcatctgcagat
gaccatcttgaggctgctgcatctgttccaaaggctgtctccaccccgaccgctctttat
gttgttctacctctcgctcttgtttgtctgctggcttttggtggcgttttgctctggagg
aactacagactgaaaaacaccaacacaattcactttgacaaccccgtctatcaaaaaacc
acagaggaccaagtgcacatttgcaggagcctcagccacgacggctacacgtaccctaag
agacaggctgtgagcctggaggacgaagctgataatccagccttcactgaaaactga
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