Betta splendens (Siamese fighting fish): 114862379
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Entry
114862379 CDS
T08231
Symbol
irf5
Name
(RefSeq) interferon regulatory factor 5 isoform X1
KO
K09446
interferon regulatory factor 5
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
114862379 (irf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bspl03000
]
114862379 (irf5)
Transcription factors [BR:
bspl03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
114862379 (irf5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
114862379
NCBI-ProteinID:
XP_029018447
UniProt:
A0A6P7NFN0
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Position
9:complement(13459236..13464033)
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AA seq
481 aa
AA seq
DB search
MSGHPRRIRLKPWLLAQVNSGKYPGLHWLSPEHRLFQIPWKHATRHTPASDEENTIFKAW
ALETGKYQEGVDEPDPAKWKANLRCALNKSREFQLKYDGTKDTPVQPFKIYEVCEQLGNA
DGLDEEDDEMPNLMELSINPRISDPPFNSFNTSFSSNENFVIPVPLLPNSSLPVSSDLQA
QHQMLDQGSFVHAAGLPSGVQTLNPQSASTASANPGPDLMDTSSIEGVQNREDPQNHQPC
KYDLLSSVPLTDLDLRFQYRGRPMGSLTVSNPQGCRLYYGHLEPTPEQVDLFGPISLQQV
LFPGTVEVQNQKQRFYTEALLDVMDRGLILEILEQDIYAVRLCQCKVFWSGPGMPEHGPP
NPLEREKKVKVFSLNNFLQGLILFQKGEAPNPPPFEIHFCFGEDWPDKKPKEKKLIMVQV
VPVVARILTEMFSGELSWSTDSIRLQISNPDVKDLTVEQFKELQKLLQSQHIQGPWTPAV
H
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagtggacatccccggcggatccgtctgaagccctggctcctcgctcaggtgaacagt
ggcaagtatcctggtctccactggctaagcccggaacaccgacttttccagatcccctgg
aaacacgcgacccgacacacaccggcatcagacgaagaaaacaccatcttcaaggcgtgg
gctctggaaacagggaaataccaggaaggtgtggacgaacccgaccccgccaagtggaaa
gcaaaccttcgctgtgccctaaacaagagcagagagttccagctgaaatacgatggaacc
aaagacacaccggtacagccgttcaagatctacgaggtctgcgagcagctgggtaacgcg
gatggacttgatgaggaggacgacgagatgccgaatctgatggagcttagcatcaacccc
cggatcagtgacccccccttcaactccttcaacaccagtttttcttccaatgagaacttt
gtgatcccggttcccctcctgcccaacagcagtctccctgtaagctctgacctccaggct
cagcatcagatgctggatcaggggagctttgtccatgctgcaggcctaccaagtggagtc
cagaccctgaaccctcagtctgcttccactgcgtctgcaaaccctggtccagacctgatg
gacaccagcagcatagaaggcgtgcagaaccgagaggatcctcagaaccaccagccctgc
aagtacgacctgctgagcagcgtcccattaacagatctggacctaagatttcagtatcgt
ggccggcccatgggttcgctaactgtcagtaaccctcagggctgtcgtctctactacgga
cacctggagccaacccctgagcaggtggacctttttggaccaatttccctacagcaggtt
ctgtttccgggtacagtggaagtccaaaaccagaaacagcgcttttacacagaggccctg
ttggatgtaatggaccgaggtcttattttggagatcttggaacaggacatctatgcagtc
cgtctgtgtcagtgtaaggtgttctggtctggaccaggaatgccagaacacggtccacca
aatcccctcgagagagagaagaaagtcaaggtgttcagtctcaacaacttcctgcaagga
ctaatcctgttccagaagggtgaagctcccaaccccccaccctttgagatccacttctgc
tttggagaggattggcccgataagaaacccaaagagaaaaaactcatcatggtccaggtg
gttcctgtggtggctcggattctcacagagatgttctctggagaacttagctggtccaca
gacagcattcggctgcagatctccaaccctgatgtgaaggacctaacggtagagcagttc
aaggagctgcagaaactcctgcagagtcaacacatccaggggccctggacacccgctgtc
cactga
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