Betta splendens (Siamese fighting fish): 114864035
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Entry
114864035 CDS
T08231
Symbol
kdm2ab
Name
(RefSeq) lysine-specific demethylase 2A isoform X2
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
114864035 (kdm2ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bspl03000
]
114864035 (kdm2ab)
04121 Ubiquitin system [BR:
bspl04121
]
114864035 (kdm2ab)
03036 Chromosome and associated proteins [BR:
bspl03036
]
114864035 (kdm2ab)
Enzymes [BR:
bspl01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
114864035 (kdm2ab)
Transcription factors [BR:
bspl03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
114864035 (kdm2ab)
Ubiquitin system [BR:
bspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
114864035 (kdm2ab)
Chromosome and associated proteins [BR:
bspl03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
114864035 (kdm2ab)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
114864035 (kdm2ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
JmjC
F-box
Cupin_8
LRR_6
C1_1
Cupin_1
Motif
Other DBs
NCBI-GeneID:
114864035
NCBI-ProteinID:
XP_029020466
UniProt:
A0A6P7NKQ8
LinkDB
All DBs
Position
10:complement(13353362..13363426)
Genome browser
AA seq
1291 aa
AA seq
DB search
MEDPHTRYSKRLRTGTRRRYQDDGISDDEIEGKRTFDLDEKLQCDRFGSDLVRYMDGKEF
TFEYIQREGLRDPIIFKSKDDLGIQMPDSDFSVSDVKLFVGSRRIVDVMDVTTQKGIEMS
MAQWRRYYETPPSEREKLYNVISLEFSHTRLENLVKRPSSVDLIDWVDNMWPRHLKERQR
DSTNAIIDMHYPKVQKYCLMSVQGCFTDFHIDFGGTSVWYHILRGRKVFWLIPPTPQNLE
MYENWVLSGKQGDIFLGDKCHDCQRIILHQGNTFIIPSGWIHAVYTPEDTLVFGGNFLHS
FNIPMQLNIYSIEDRTRVPAKFRYPFYYEMCWYVLERYLYCLTKISHLTPEFQKYSLGIG
LTQADLEPNEQTGNGNFNGVESDTENENVKLKEDEIQENESAEYTQTQHALTPFELEGLW
NLLGKLEELPAQKKCVPDGIQNAAALLDDMRAVLKEHASDDPKLSYTGQPIVKWPKRPSW
YQPPINPAPVLYRPRLGPTLHKSLGQRPTKHSSISALRRRRVRCKRCAGCCRKECGTCQY
CQDMRKFGGPGRMKKGCIMRQCLTPALPNTARCAICGEGESDETNPSTFSLMECSVCSQI
AHRQCIKEPGEGKINKDLPSCWECPKCYQGNGSASESSTDEESEESEGSTSYPPSKLAYR
EGIGVGEGMRQGRHNNAPSRPTAPPPSQKLLLQHQQNRKRASALELRLKKRIKLERSKLL
KHSALYRSPTMLSRLRSPTSRLSQGRGRPSTWTSGSSYHSSPRGTGSFQHQQSSYGLVLS
PTGESRRGRGRGVRLRGGGAGRGVRGGRSHGELEEESEDSSSTSSTSSSSSEDEKEERGE
NSGKGGDKENQPQMRRERQRAKEREEMVNQNGGEDDEEEEMEHDVQPGDKEDSSIKVTLQ
KPSRAKRDPSAIVPKLEAIAPQTARSTIQSQTRALVRPPIRNRDSCTDQHSNRHTLPHTR
SGHTDTSHPERPEASKSLRSSKPAKLRHGSSSSSSSELPHFRIPLSALQEGGSEADRDSN
GSGPSCEREVWVSVFRYLSRADLCVCMAVCKNWYKWCLDKRLWAQIDLSIKHTITPQALT
GIIKRQPVTLNLSWTNISKKQLNWLVSRLPGLKDLMLAGCSWASISALCSSGCPLLRSLD
LRYADGVKDSQIRDLVTPPGCDNRSQLRSMQCLRLAGLDISDSTVRLVIRHMPYLTKLDL
SHCNSLTDHSINLLTAVGSSTRNTLADLNLGGCSKLTDTCLKYLRRLSCISLLDLRGCKG
VSRKACEAFISELSVNTLYCLSDEKLIQRIS
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggaggacccccacacacggtacagcaaacgcctgcgtacaggtacgcggcgccgctac
caagacgatggaatctcggacgatgaaattgaaggcaaacgaacgtttgatctggatgaa
aagttgcagtgtgacagatttggctctgacttggtcagatacatggatggtaaagaattc
acgtttgagtacatccagagggaagggctcagggatccaattatctttaaatcaaaagat
gaccttggcatacaaatgccggacagtgatttcagtgtgagtgatgtcaagttgtttgtt
ggtagtcgacgcattgtagacgtgatggatgtgaccacacagaagggaatagagatgtca
atggctcagtggcgacgttactatgagacgccaccatcagaaagggaaaaactctataat
gtcattagcctggagttcagccacacgaggctagaaaatctagtgaaacggccgtcttca
gtggatcttattgactgggtggataacatgtggccccgccatcttaaggagagacagaga
gactccactaatgctataatagacatgcattatcccaaagtacagaagtattgtctcatg
agtgtgcagggctgctttacagatttccacattgactttggaggcacatcggtgtggtac
cacatcctgcgaggaagaaaggtgttctggctgattccacccacaccacagaacctggag
atgtatgagaactgggttctatctggaaaacagggagatatattcttgggggacaagtgt
cacgactgtcagaggataatacttcatcagggcaacaccttcattataccatcaggatgg
attcatgctgtgtacaccccagaggacacgttggtgtttgggggaaatttccttcatagt
tttaacatccctatgcagctcaacatttacagcattgaggatcgaacacgggtgccagca
aagttccgctaccctttttattatgaaatgtgctggtatgtcctggaacgatacctctac
tgtctgaccaaaatctctcacctcactcctgagttccaaaaatactcccttggcatagga
ctgacccaggctgatctggaaccaaatgaacagactgggaatggcaacttcaatggagtt
gagagtgataccgaaaatgagaatgttaagttgaaggaagatgaaatccaagaaaatgag
tctgcagagtatacccagactcaacatgcattgactccctttgagttggagggattgtgg
aacctcttaggaaaactagaggagcttcctgctcagaaaaagtgtgtacctgatggtatt
cagaatgctgcagctctactcgatgacatgagggctgttctgaaggagcatgcaagtgat
gaccctaagttgtcctacactggccagcccattgttaagtggcccaaaaggccgtcatgg
taccagcctcctataaaccccgcccctgtcctttaccgtccaagattgggcccaaccctc
cacaagtccctgggacagagacccaccaagcactcatccatctctgctctaaggcgcaga
cgggtgaggtgcaagcggtgcgcgggttgctgcagaaaagaatgtggcacctgccaatac
tgccaagatatgaggaagtttggtggacctggacgcatgaaaaagggctgcatcatgaga
cagtgtctaacacctgctttgcccaacacagcacgatgtgccatatgtggagaaggtgaa
tccgatgagaccaatccaagcactttctcactcatggagtgctcagtctgctcacaaatt
gctcatcgtcaatgtattaaggaacctggggaagggaagatcaataaggatttgcccagc
tgctgggaatgtcccaaatgttaccaagggaatggttcagcatcagagtcttccaccgat
gaggaaagtgaggaatcggagggctcaacttcctacccaccttccaaacttgcatatcgg
gaaggcattggtgtgggtgaagggatgagacaagggagacacaataacgccccatccaga
cccacagcaccaccaccttctcagaaactattactgcagcatcaacagaaccgcaaacga
gcaagtgcactggaactcagacttaagaagaggataaaattggagcgcagcaaacttttg
aaacattcggctttgtatcgttctcccacgatgctgtctcggttgcgctctccgacaagc
agactatctcagggcagaggtcggccttccacttggacgagtggctcctcgtatcatagc
tctccaagagggaccggatcctttcagcatcagcagtcttcctatggtctggtactctct
cccacaggagagtctcgcagagggagaggaagaggagttaggctgcgaggaggaggtgcc
ggaagaggcgtcagaggtggcaggagccatggagaactggaggaggagagcgaagacagc
agcagcactagcagcaccagcagcagcagcagtgaggacgagaaagaggagagaggggag
aacagcgggaaaggaggagataaagagaaccaaccacagatgaggcgagaaagacagaga
gccaaagaaagagaggagatggtaaaccaaaatggtggggaggacgatgaggaggaggag
atggaacatgatgttcaaccaggggacaaggaagactcctctattaaagtgacactccaa
aagccctcaagggccaagcgggacccatcagccattgtccccaaattggaggctattgct
cctcaaactgcacgttccacaatacagagccagaccagagcgctggttcgcccccctatt
agaaatcgggattcatgtactgatcaacactccaataggcacacactaccacatacgcgc
agtggacacacggacacctcccatcctgagaggccagaggcctctaagagtttgaggtca
agcaagccagctaagctgagacatggttcttcctcttcgtcatcctcagaacttcctcat
ttccgcatacctctgtccgctctgcaagaaggagggagcgaggcggacagggacagtaat
gggagtgggccgagctgtgagagggaggtgtgggtgtctgtcttccgctacttaagtcga
gcagatctctgtgtctgcatggctgtctgcaagaactggtacaaatggtgtttagataag
cggctttgggcacagattgacctgagcatcaagcataccatcacacctcaggccctcaca
ggcatcataaagagacagccggtcacactcaacctctcttggactaacatctctaaaaag
cagctcaactggcttgtgagccgccttcctggtctgaaggatctgatgctcgcaggttgt
tcttgggcgtctatatcagctctctgctcctctggttgccctcttctcagatctctggac
ctgcggtatgcagatggggtcaaagactctcagatcagggatctagtcacccctccaggc
tgtgacaatcggagtcagttgcggagtatgcagtgtttacgactagcaggcctagacatc
agtgactccaccgtgcgccttgtgattcgccacatgccctatttaacgaaactggatctc
tcccactgcaacagcctcactgaccactccattaacctgctgactgcagttggctcatcc
acccgaaacacactcgcagacctcaatctgggaggttgcagtaaactaacagacacgtgt
ctaaagtatctccgccggctgtcttgcatctcactgcttgacctgcgaggctgtaaaggt
gtctcacgcaaggcctgtgaagctttcatctctgagctttcagtcaacaccctgtactgc
ctatcggatgaaaaactgatccagagaatttcctaa
DBGET
integrated database retrieval system
