Bradyrhizobium symbiodeficiens: CIT39_08255
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Entry
CIT39_08255 CDS
T06284
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym01501
beta-Lactam resistance
bsym01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CIT39_08255
01503 Cationic antimicrobial peptide (CAMP) resistance
CIT39_08255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bsym03036
]
CIT39_08255
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bsym02000
]
CIT39_08255
01504 Antimicrobial resistance genes [BR:
bsym01504
]
CIT39_08255
Chromosome and associated proteins [BR:
bsym03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
CIT39_08255
Transporters [BR:
bsym02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CIT39_08255
Antimicrobial resistance genes [BR:
bsym01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CIT39_08255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
AWM06441
UniProt:
A0A2U8Q8T3
LinkDB
All DBs
Position
2456921..2458117
Genome browser
AA seq
398 aa
AA seq
DB search
MSPTEPRSPVSHRKLGIFGVVALIAAGLVVGTGIRAREEQDSKLKEWTDDQAVPSVAVTQ
PSAKALNATLDLPGRLEAYYRAPIFARVPGYLKSWSADIGARVKAGQVIAEIEAPDLDQQ
LLQARADLASQQASARLSEATLNRRKTLVASNFVSAQEIDERTADLSNKNAAVRSGQANV
ERLEALAGYKKITAPFDGVVTARDTDVGALINAGGGSGPAMFVVSDITKLRVYVNVPQNY
VPAIKIGAKATLVMPEYPNRTFQATVEASSQAVDVASGTTRMQLGLDNSSGELMPGGYAS
VKLNLQRDSAPLSIPASALIFNSNGLRVATVGADDKVLFKPVTIARDLGREIELASGIAA
DDRVITAPPDGLSDGDAVRVVGAKAKPATASEKQPPKG
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccactgaaccccgctcgccggtgtcgcaccggaaactgggcatcttcggcgtg
gtggcgctgatcgcggccggcctcgtcgtcggcaccggcatccgcgcccgcgaggagcag
gactccaaattgaaggaatggaccgatgatcaggccgttcccagcgtcgcggtgacccag
cccagcgccaaggcactcaacgccaccctcgatctgccgggccggctggaagcctattat
cgcgctccgatctttgcccgcgtccccggctatctcaagagctggagcgccgatatcggt
gcgcgcgtgaaggccggtcaagtgatcgccgagatcgaggcgcccgacctcgaccagcaa
ctgctgcaggctagagccgacctcgccagccagcaggccagtgcgaggttgtcggaagcg
actctcaatcgccgcaagaccctggtcgcctccaacttcgtctccgcgcaggaaatcgac
gagcgcaccgccgatctctccaacaagaacgcggcggttcgctcgggccaggccaatgtc
gagcggctggaagcgcttgccggctacaagaagatcacggctccgttcgacggggtcgtc
accgcgcgcgataccgatgttggcgcgctgatcaatgccggcggcggctcgggacctgcg
atgttcgtggtctccgacatcaccaagctgcgtgtctatgtcaacgtgccccagaattac
gtgccggcgatcaagatcggcgccaaggccaccctcgtgatgccggaatatccgaaccgg
accttccaggcgacggtggaggcctcctcgcaggccgtcgacgtcgcctcgggcaccacg
cgcatgcagctcgggctcgacaattcctcaggcgagctgatgcccggcggctatgccagc
gtgaagctcaacctgcagcgcgattccgccccgctcagcattcccgccagcgccttgatc
ttcaacagcaacggcctgcgtgtcgcgaccgtcggtgccgatgacaaggtgctgttcaag
ccggtgacgattgcccgcgacctcggccgcgagatcgagctggcctcggggatcgcagcg
gacgatcgcgtcatcaccgcaccgccggacggtctgtcggacggcgatgcggtgcgcgtg
gtcggcgccaaggccaagccggcgaccgcgtcggagaagcagccgccgaaggggtga
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